Vespa crabro (European hornet): 124423457
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Entry
124423457 CDS
T09462
Name
(RefSeq) probable nucleoporin Nup54
KO
K14308
nuclear pore complex protein Nup54
Organism
vcrb
Vespa crabro (European hornet)
Pathway
vcrb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124423457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcrb03019
]
124423457
Messenger RNA biogenesis [BR:
vcrb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124423457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
124423457
NCBI-ProteinID:
XP_046817129
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All DBs
Position
4:84427..88611
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AA seq
631 aa
AA seq
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MSFGTSFGTSTSAPASSFSFGSTATAAPTPIKLGFGTPAFGLSTSTTSATNLFGTPSTQT
TGFGTGTGFGSPAATGFGSIPNIGFGTTSAFGTPATSGFGTGSSFGTTSASTTTGFGTPS
TFGSTPVSSTGFNIFGTTTATTSLGFGGFSGFGTATTTSAPSLFSGFGTTSTVPSTNFSS
SIGGFGSFGQKPTTTTAITGFGTQTTGNIFGSTGFTGFGTGIQTQQQQQQIQQQQQQQQS
SGISEALYNAVFNCQLYNDERDNTIARWNLIQALWGTGKAYYSVNAPPIDLDQENPLCRF
KAIGYSRIPDADNNDGLVVLCFKKKEKNVTEGKQQLIAFLNGILGNKPNLTVIIDSIKST
GKNKSQVTIFISEKGVTGSSRKIPANELVAYLSQPMQKQQLVQNGVKDLFPFVKLDPTQL
KEYLDNPPCSIDPRLWKQAQLDNPNPEMYIPVPMIGFQQVKYRLKCQKEETARHRAFLDM
AAERIQGLQRQHTATQARLKEHRRILLELQHRVLQVLVRQEITRKVGLSLQPEEEVLTRR
FEAMHSQISAPTQFKGRISEMLSQLRMRRHIDSQNQERYTMDPIAQDDIKTYLSMEQQGM
AQLIDTINADLESLKIIKDGMSDLLLSHSIP
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttggaacaagctttggaacgtccacatcagcaccagcttcttcctttagtttt
ggttcgacagcaactgcagctcccacaccgatcaagctaggatttggaacaccagccttt
ggattaagtacgtcaacgacttcagccacgaatctctttggtaccccatcaacgcaaacc
actggatttggaactggaacaggatttggatcaccggcagctacaggttttggtagtata
ccgaatattggatttggaacgacttcggcatttggtactcctgctaccagtggttttggt
actggatcatctttcggtacaacttcagcgtctacgaccactggatttggaactccttca
acgttcggcagtacacctgtttcatcaactggttttaatatattcggtacaacgacggcc
acgacgtcattaggatttggcggttttagcggatttggaacggcaacgacgacctccgca
ccaagtttattcagtggatttggcacgacgagcacggttccatcgacaaatttttcttcg
tccataggtggttttggtagcttcggccagaaacctacaacgacaaccgccatcacaggt
tttggcacgcaaacaacaggtaatatttttggctccactggttttaccgggtttggaact
ggaatacaaacgcaacaacagcaacaacaaatacaacaacagcagcaacaacaacagtcc
agcggtatttctgaggcactttataacgctgtgttcaattgtcagttatacaatgacgaa
cgagataatacaattgccagatggaacctcattcaagcattgtggggtaccggaaaggca
tattattcggtaaatgcaccgcctatcgatttagatcaagaaaatccattatgtaggttt
aaggccattggctatagccgtattcccgacgccgataataacgatggattggttgtactt
tgttttaaaaagaaagagaaaaatgtaacagaagggaaacaacaattaattgcattttta
aatggcatccttggaaataaacctaacttgacagtgataattgatagtattaagtctacg
ggaaaaaataaaagtcaagtgactatctttatttctgaaaaaggagtaactggaagttcg
agaaagattcccgctaatgaattggtcgcttatctttctcagcccatgcaaaaacagcaa
cttgtgcaaaatggcgtgaaggacttgtttccgttcgttaaactcgatcctacccaattg
aaggaatatttagataatccgccttgttcgattgatccacgattgtggaagcaggctcaa
ttggacaatccaaatcccgagatgtatatacccgtaccgatgataggctttcagcaagtt
aaatacagattgaaatgtcaaaaggaagagaccgctaggcatagagcttttttagatatg
gctgcggagagaattcaaggtttgcaaagacaacataccgctacgcaggcaaggttaaag
gaacataggagaatattattagaactacaacacagagtattacaggtattggtacgtcag
gaaattacgcgtaaagtaggtttgtcattacaaccagaggaagaagttttgacgcgtaga
ttcgaagctatgcattctcagataagcgcgcctacacaatttaaaggaagaatcagcgaa
atgttgtctcagcttagaatgagacgacatatagatagccaaaatcaagaaaggtatacg
atggatccgatagcacaagacgacattaaaacgtatttaagcatggagcagcaggggatg
gctcaacttatcgatacgataaatgccgacttggaaagtttaaaaattattaaggacggt
atgtcggatcttctattgagtcatagtataccctga
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