Vespa crabro (European hornet): 124423465
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Entry
124423465 CDS
T09462
Name
(RefSeq) protein HBS1 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
vcrb
Vespa crabro (European hornet)
Pathway
vcrb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124423465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcrb03019
]
124423465
Messenger RNA biogenesis [BR:
vcrb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
124423465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
Ras
SpoIVA_ATPase
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
124423465
NCBI-ProteinID:
XP_046817144
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Position
4:11451266..11455693
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AA seq
696 aa
AA seq
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MSRHRDVRCMNYSDEYDGYDDVYGHSVEDDYCVSPSAEQFLFDRSKQQNIASFIMEPDIV
EDNEDDNTVSSLASKKSDLSELERVKLLSCMEAIKNVIGDSIAESKLEEEIIQSRFDTEV
ALDKLLRIPPQKSITEQSRSSKECPNPCPGNKLSSKSTLQISTPSMVKVVPAGTSSIVKG
FTVTGSENTGHLSPHIQTPRSQSPCSEQDSPNVKRKENVKQDKSIVSLETDSLRSQSPMS
GHVTPDLDYKTKSIEDKRDVLRIYKDRRSNNKEQLHLVVVGHVDAGKSTLLGRLLCDLGQ
VPSRLIHKYQQESKKIGKQSFAYAWVLDETGEERERGITMDVGHSKFETDNKCITLLDAP
GHKDFIPNMITGATQADVALLVVDATRGEFETGFDSGGQTREHALLLRSLGVSQLAVVVN
KLDTVNWSKERFNEIVNKMSVFLKQAGYRETIIFVPCSGLSGENIVTAPKTEGLSNWYTG
PTLVNVIDNFKCPERPVNKPFRFSINDIYKGTGSGFCVSGHVETGMVAIGDKVLVLPQNE
VAFVKGLQADDVSIVNAFAGDHVSLTLSGIDQQNVGIGDVICNPQNPVPVTTCFQAHVVI
FSIVVPITKGFPVIMHQQSLVQPAIISKLIAQLHKSTGDVIKKKPRCLPKNSSAIIEIVT
QTPVCMELYKDVKQLGRIMLRVEGTTIAAGLITKIK
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcatcgagatgttcgatgtatgaattattcggatgagtatgatggttatgac
gatgtatatggacactcagtggaggatgattattgcgtatcgcccagtgctgaacaattc
ttgtttgatcgaagcaagcaacaaaatattgcttcttttattatggagccagatatcgtt
gaggataatgaggatgataatacagtatcatcccttgcaagtaaaaaatcagatctttct
gagctagaaagagtgaagttattatcttgcatggaagctataaaaaatgttattggagat
tcaatagctgaatctaaactcgaagaagaaattatccagtcaaggtttgacacagaagta
gcgctagataaacttttaagaataccaccccagaaaagtattaccgaacaatctagaagt
agtaaggagtgcccgaatccttgtccaggtaataaactgtcatcaaaatcaacattacaa
ataagtacaccttcaatggtaaaagttgtgccagctggaacaagttctattgtcaaaggg
tttactgtcactggatcagaaaatacaggtcatttgagtccacatattcagactccacgc
tctcaaagcccatgttctgaacaagacagtccaaatgtaaaacgtaaagaaaatgtgaaa
caagataagagtatagtttctttagaaactgattctttaagaagtcaatctcccatgtct
ggtcatgttacacctgatttagattataagacaaaatctatagaggacaaacgtgatgtt
ttacgtatttataaagatagaagaagcaacaataaagaacaattacacctagttgtcgtc
gggcatgttgacgctggaaagagtaccttgcttggacgacttttgtgtgatttaggacaa
gttccatcaagactaattcacaagtatcaacaagagagtaaaaagattggtaaacaatcc
tttgcttatgcatgggtgctagatgaaacaggagaagaaagggaacgtggaataacgatg
gatgttggacattctaaatttgaaactgacaataaatgcattactcttttggatgcacct
ggccacaaggattttattccaaacatgatcactggtgccactcaagcggatgttgcctta
ctcgtagtagatgctaccagaggtgaatttgagactggatttgatagtggtggacagact
agagaacatgctttattattacgttctttaggagtgtctcaattagctgttgtagttaac
aaattggatacggttaattggtcaaaagaaagatttaacgaaattgttaataaaatgagt
gttttcttaaaacaagctggttatagagagaccatcatttttgtaccttgcagtggactc
tcaggagaaaatatagtcacggcaccaaaaaccgaaggtctttccaattggtatactgga
cctacattagtaaatgttatcgataattttaagtgtccagaacgtccagttaataagcca
tttagattttctataaatgacatatacaaaggtactggctctggattctgtgtatctggt
catgtagaaacaggcatggtggctataggggataaagttttggtgttgccgcaaaacgaa
gttgcatttgtaaaaggtttacaagcggacgatgtatctatagtaaatgcctttgccggc
gatcatgtttcattgacattatcaggcattgaccaacaaaatgttggaattggtgatgtc
atttgcaatccacaaaatcccgtaccggtaacaacatgttttcaggcacatgtagtcata
ttctctattgttgtgcctattacaaagggcttcccagtaataatgcatcagcaatctttg
gtacaaccagctattatatctaaattaatagcacagcttcataaaagcactggagatgtg
ataaaaaagaagccgcgctgtttacctaaaaactctagtgcgattattgaaatagtaacg
caaactccagtttgcatggaactgtataaagacgttaaacagcttggtaggataatgtta
agagtggaaggtacaacaattgcagccgggctgattaccaaaattaaatga
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integrated database retrieval system