Vespa crabro (European hornet): 124423736
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Entry
124423736 CDS
T09462
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
vcrb
Vespa crabro (European hornet)
Pathway
vcrb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124423736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcrb04131
]
124423736
Membrane trafficking [BR:
vcrb04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
124423736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
WD40_CDC20-Fz
TPR_Vps41
zf_RING_Vps8
ANAPC4_WD40
Beta-prop_EML_2
zf-RING_Vps41
WDR55
Prok-RING_1
TPR_VPS8_2
zf_RING_Vps8_fungal
Beta-prop_IP5PC_F
WD40_WDHD1_1st
zf-RING_2
Beta-prop_WDR90_POC16_2nd
PQQ_2
zf-RING_UBOX
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
124423736
NCBI-ProteinID:
XP_046817786
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Position
4:10988747..10994677
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AA seq
1300 aa
AA seq
DB search
MAENGLGSEIGSQEYLATEAINLDFIELDHAEYAIPTVEELPSLESILTEPDCTSLSGTD
DDLGAASIEKLGSSETTSVGSHLSLNSLNKSSKASQHPPSGAILRHVILKGISAQIVSAS
ERVNAGLASAVTAGGNMLVIGTSHGLILSFDSSQTLRWCDQEARYQGSVSALCFNHDGSR
ILAGFARGLILMIDSSDGKVLRTLTEVHPLDTAVLHVKFTDSSKVALCSDSGGSVFELNF
TRVMGVRGCDSRCLFSGSRGEVCTLEPLLLNNLPSHPLKNYTLVAMATLSKVIVVCIRPR
MRVLLTHSLSGAAIAPPQLSWQLVVIQAADASRVVDPVLALARDDVVHFYQVSTEAGTRV
KLSPLRRMSFPYTISNLRWLNPRSLVVLDTQERLHLLDVRTQDSLETLDMSRVCISYASS
HFKGLCTGGNVSKAMALAGERACYNTVITFGNQLLLLGTKSLHAVCIRTWTERLQHLTMQ
GRFPEALALGLSFYQDKGKAVVGLRGSKQRRKQIVRDTVCQVLIQYMEQLNHSSMTDNTE
FDIVSICVDYCIQLENTELLFGRLWDLVSETEGLKSSYLCALESPLLNGSLNPRLPPLIV
QQLFILYDQEGKVDSLQTIAVLLDIDCLDIHQITTICRRRSLWEALIHLQTAALGDFTAP
IHQLVPILQNALTNTKESLSRDILQLGNALLVYASCCLAGRGFPRDTLPEVMSQRAKTDI
LRALLSQHSSLASDAERQYPYLRTLLRFDAKGFLDVIAIAFQEPEFTSEMGLRQRQRLID
ILLSIVLPSTPLTPMNSDYITDEQRTLVLIFIVNEAAGDTINLEPNMLIRIVEVLCDCSS
VVTSRDLKSEKENAVLGLLNSKKLRNISDTTLLNLAQKANFMRVAELLYTAREDWVAVCK
CMILDHTRHCDIWPWLERLPAASLYPVLVTSASALVAINVTQFALIIANRVQNKIPEILK
KFDGTISLEYALLGALYQLSQYKEEETSPELSTELLEKYLTLMCKIEPENVVNHINGPHG
CRLDEALKIVKQSNHIDAEAVMLEKLGNYQEAFDLLLNQFKNHLNMYCKDKAFEKEAIIT
AMQLAGMCRRSAGSLSWMPLVEVVLKTHSDSINENVEKLSGNLLKIILESLSGTTALSTV
LEQILKHPLSKSGTIGDIRQLLEGVLTHSQYEQTLVETTARLVSLELHKALKTSLRDAGK
ACASISLICPICRQILCQSTNYVAIFECGHGYHLDCLGEPRSCYKCLNAKGWAPVVTNII
RTSNSHLERKQILPPEFMRTKNFSLSLAPPTSVPDLEGIF
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaatgggttgggatctgaaattggatctcaagagtatcttgcaacagaagct
attaatttagattttatcgagttagatcatgcagaatatgccataccaactgtggaagaa
ttaccctccttagaaagtatattaacagagcctgattgtacgtcattgtcaggaacggac
gatgatcttggagctgcatcgattgagaaattaggtagtagtgagacaaccagtgttggc
agtcatttatctttgaattcactcaataaatcttccaaagcttcacagcatccaccgtca
ggagctattttaagacacgtaattttaaagggtatttctgcacaaattgtatcagcaagt
gaaagggtcaatgccggattagcaagtgcagttactgctggtggaaatatgttagtaatt
ggtactagtcatggtttaatattaagctttgattcatcacaaacattacgatggtgtgat
caagaagccagatatcaaggatctgtttctgcattgtgttttaatcacgatggaagtaga
atattggctggttttgctagaggtcttattttaatgatcgatagtagtgatggaaaagtt
ttaagaacacttaccgaagttcatccacttgacacggctgtattacatgttaaattcaca
gattcttcaaaagttgcactttgtagcgatagcggtggatctgtatttgaattaaatttt
acaagagttatgggagttcgaggctgtgatagtagatgcttatttagtggttctagaggt
gaagtgtgcactttagaacctttattactaaataatttaccttctcatccattaaaaaat
tacacattagtagcaatggccacattatctaaggtgattgttgtttgcatacgacccaga
atgagagttcttctaacacattcactatcaggtgctgcaattgcacctccacaactttct
tggcagttagttgtaatacaagcagctgatgcatctcgagtagttgatccagtattggct
cttgcacgggatgatgtagtacatttttatcaagtatctactgaagctggtaccagagtg
aagttatctcctcttcgcagaatgtcatttccatatactataagcaatttacggtggttg
aatccaagatctttagttgtattagatactcaagaaagattacatttattagatgtaaga
acgcaagatagtttagaaacattggatatgagccgtgtttgtatttcatatgcttccagt
catttcaaaggattatgtacaggtggtaacgtttctaaggcaatggcattagctggtgaa
agagcttgctacaatactgttataacatttggaaatcaacttttgttattaggtacaaaa
agcttacatgcagtatgcataagaacatggacagaacgattgcagcacctaacaatgcag
ggtcgttttccagaagctttggccttaggactttccttctatcaagataaaggtaaagct
gtcgttggtcttagaggctcgaaacaacgacgaaaacaaatagttcgagacacagtttgt
caggtcttgattcaatatatggaacaattgaatcattcctctatgactgataatacagaa
tttgatatagtcagtatttgtgtggattactgtatacaattggaaaatacagaattatta
tttggacgattatgggatttggtatctgaaaccgaagggctcaaatcaagttatttgtgc
gctcttgaaagtccattactgaatggaagtctcaatccaagattaccacctttaatagtt
caacaattatttatcttgtatgatcaagaagggaaagtggattcgcttcaaacaattgcc
gttttattagatatagattgcttagatattcatcagataacaactatttgtcgccgaaga
agtttgtgggaagctcttatacatcttcagacagcagctttaggtgattttacagcacct
atacaccagcttgtgcctattcttcaaaatgcattgacaaataccaaagaatcattatct
cgagatattctacaacttggtaatgcacttttggtttatgctagttgttgtcttgcggga
cgcggtttccctagagatacacttcctgaggttatgtcacagagggcaaaaacagatata
ttgagagcacttctctctcaacattccagtctagcaagtgatgcagaaagacaatatcct
tatttgaggacgctgcttcgttttgacgcaaaaggttttttagatgtaatcgccattgcc
tttcaagaaccagaatttacctctgaaatgggtcttagacaacgacaaagactcatagat
attttattgagcattgttctacccagtacacctcttactccaatgaattcagattatatt
acggatgaacaaaggactttagttctaatatttatagtaaatgaagcagcaggagataca
attaatttggaaccaaatatgttaattagaatagtagaagtattatgcgattgctcatct
gttgtcacatctagggatcttaaatctgaaaaagagaatgcagtgttaggactattaaac
tcaaagaaattgcgcaacatatcagacactactttattgaatcttgcacagaaagctaac
tttatgcgagtcgcagagttgctgtatactgccagagaggattgggtagcagtttgcaag
tgcatgatacttgatcatactagacattgtgatatctggccttggttggagcgacttcct
gcagcttcattatatccggtcttagtaactagtgcttcagctctggtggcaataaatgtt
acacaatttgctcttattattgcgaatcgagtgcaaaataaaatacctgaaattctcaaa
aaatttgatggtactataagtttagaatatgctctcctaggagctctatatcaactcagt
caatataaggaagaagaaactagtccagaattgtcaactgaacttctggaaaaatattta
acacttatgtgtaagatagaaccagaaaatgtagtcaatcatataaatggaccacatggt
tgtagattagatgaagcattaaaaatagtaaaacaatcaaatcatatagatgctgaagca
gtaatgcttgaaaaattaggaaattatcaagaagcttttgatcttttgttaaatcaattt
aaaaatcacttaaacatgtattgtaaggacaaagcttttgagaaagaagctattattact
gcaatgcaattagcagggatgtgcaggagatctgctggaagtttgagttggatgccactt
gtagaagttgtattgaaaactcattcagacagtatcaatgaaaatgttgagaaattgagt
ggaaatttgttaaaaattattttggaatcacttagtggtacaacagcactatcaactgta
ctagaacaaattttaaaacatccactatcaaaaagtggaacgataggtgatatacgtcag
ttactcgagggagtattaactcactctcagtatgaacagactctggttgaaactactgca
cgattggtcagcttagaactccataaggcattgaaaacatctttgagagatgcaggaaaa
gcttgtgcaagcatttctcttatttgtcctatatgtagacaaattctatgccaaagtacg
aattacgtagcaatttttgaatgtggacatggatatcatttagactgtttgggagaaccc
agatcttgttataaatgtttgaatgccaaaggatgggcacctgttgttactaatattata
cgaaccagtaattcacatctggaaagaaaacagattttgccaccagaatttatgcgtact
aaaaacttctctttaagtcttgcaccaccaacttctgttcctgatcttgaaggcattttt
taa
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