Vespa crabro (European hornet): 124423776
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Entry
124423776 CDS
T09462
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
vcrb
Vespa crabro (European hornet)
Pathway
vcrb04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
124423776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcrb04131
]
124423776
Membrane trafficking [BR:
vcrb04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
124423776
Protein recycling
Other Rab GTPase associated proteins
124423776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Hen1_N
Motif
Other DBs
NCBI-GeneID:
124423776
NCBI-ProteinID:
XP_046817910
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All DBs
Position
4:1170896..1174221
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AA seq
619 aa
AA seq
DB search
MYSIKTPSLRIDEADLKCKNGCGFYGNAEWEGYCSKCHREHLQKQRAQREYISNLQTIDI
DTSNRTLSTGYHKHEEKKSQQEKKYKLLNISFRKPTSKLQGCQELLYELTKDNSDLEKIK
AENRDLIASIVKTPVEKDVRKCIHSFVVDILQNKDIKRIEELSEITQNFYQVFAKRLENS
VKYTDISADIKERLLDYVEKYSMTLLYRILFCPPFTTDEEKDLAIQKRIRQLNWVSGKNL
ECRIHETSSEVRELVYTSITDLLNMDSAKAPQEKLACVIYCCRNIFLLLQQSVGGPASAD
EFLPALIFIVLKANPARLKSNINFITRFCNASRLMTGEGGYYFTNLCCAVSFIENLTAES
LNMAEKDFNAYMSGERVPANTWESALMMCESLHLMCEDITLLDKLKAKNLEIINEAKELQ
CRMTQFKEDIEVKVATAIEKSPLLITHSQRLPTNLDSDNIENYQLPPPIIPQVYSHPVND
QSNNISLTNNSVDLRTSLMDDCITPSPTFDFPSFTGDGSLDVSKADDETSLISLDTQCDL
LMTDSQLHEKDTPDILLGNSSTSSANLVSSIESIGQEDYHGFTIQGSHIPTIPCSTGDLS
INSAELSSDSHYSTYFHKM
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtattctataaaaacaccttcgcttcgcatcgatgaggcggatttgaaatgtaaaaat
ggttgtggtttttatggcaatgcagaatgggaaggatattgcagcaaatgtcatcgagaa
catttacaaaagcaacgagcacaaagagagtatatatcaaacttacaaactatcgacata
gatacatctaatagaactttatccactggatatcataaacatgaagaaaagaaatctcaa
caagaaaagaaatataaattattaaatatttcttttcgaaagcctacatcaaagttacaa
ggatgccaagaattactttatgaattaacaaaggataattcagatcttgaaaaaatcaaa
gctgaaaatagagatcttatagcttcaatagtgaaaacaccagttgaaaaagatgtacga
aaatgtatacattcatttgtagtagatatccttcagaacaaagatatcaaaagaatagag
gaattatcagaaataacacagaatttttatcaagtgtttgctaaacgtttagaaaatagt
gttaaatatacagatatatctgcagatattaaagaaagattattagactatgttgaaaaa
tattccatgacattattgtacagaattctattttgtccaccgttcacaacagatgaagaa
aaagatttagcaattcaaaaaagaataagacaattaaattgggtcagtggcaagaattta
gaatgtagaattcatgaaacaagttctgaagttagagaacttgtatatacatctataaca
gatttactaaatatggattctgctaaagctccacaggaaaagttagcatgcgttatttat
tgctgtagaaatatatttttattattacaacaatctgtaggtggtccagcttctgcagat
gaatttttacctgctcttatttttattgttttaaaagccaatcctgcacgacttaaaagt
aatataaacttcataacaaggttttgtaatgctagtagattaatgacaggagaaggggga
tactactttacaaatttgtgctgtgctgtatcatttattgaaaacttaactgctgaatct
ttgaatatggctgagaaagattttaatgcttatatgtcaggagaaagagtaccagcaaat
acatgggaatcagcactaatgatgtgtgaaagcttgcacttgatgtgcgaagatataacg
ttacttgataaattaaaggccaaaaatttagaaataataaatgaagcaaaagaattacaa
tgtagaatgacacaatttaaagaagatatagaagttaaagtagctactgcaattgagaaa
tcaccattattaataacacatagtcagagattgcctacaaatttagattcagataatatc
gaaaattatcaattaccaccgcctattatacctcaggtatattcacaccctgttaatgac
caatccaataatatttcactgacaaataattcagttgatttgagaacctcactgatggat
gattgtattacaccgtccccaacatttgattttccttctttcactggcgatggtagttta
gatgttagtaaagcagatgatgaaacaagtctaatcagtttagatacacaatgtgattta
ttgatgactgattctcaattacatgaaaaagatacacctgatatattgttgggaaattca
agtacttctagtgcaaatctcgtatcatctattgaatcaataggtcaagaagattatcat
ggttttactatacaaggatcacatataccaacaatcccttgcagtacaggtgatttgtcc
attaattctgcagaattgtcatcggatagtcattactctacatattttcataagatgtaa
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