Vespa crabro (European hornet): 124424256 Help Entry 124424256         CDS       T09462                                  Name (RefSeq) helicase SKI2W   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism vcrb  Vespa crabro (European hornet) Pathway vcrb03018   RNA degradation Brite KEGG Orthology (KO) [BR:vcrb00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     124424256  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:vcrb03019]     124424256 Enzymes [BR:vcrb01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      124424256 Messenger RNA biogenesis [BR:vcrb03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      124424256   mRNA degradation factors    3'-5' decay     Ski complex      124424256 SSDB OrthologParalogGFIT Motif Pfam:  DSHCT Ski2_N DEAD Helicase_C ResIII DEXQc_Suv3 MTR4_beta-barrel ATPase_2 Motif Other DBs NCBI-GeneID:  124424256 NCBI-ProteinID:  XP_046818992 LinkDB All DBs Position 5:complement(3938115..3944343) Genome browser AA seq 1219 aa AA seqDB search MELPFELPPIWPDIKTELKEYIECPERLPIHQLDHAQCYWPREPDICSLLEFDLAPLSTT LKFDRDPVTGRVGQMQEVILKGVGENARNSMSMKRIPGSVTDDVRGNITNIPFLPGGFDE PIVTDEMTENIDFERNLRTLAKGFSSGIEFEADNCTPKQESINKPTKVSKAKVQIEDDIT SKINLMALVEQEERELNLWSSVQELKDDDVQESPQIPALEDIPLLPIEPEIPVLNISEEP SKIIEMEWAEQIDVSVPITDFEKKIPDPAMTFEYELDTFQKQAILKLEENCNVFVAAHTS AGKTTVAEYAIALTQKHMTRVIYTSPIKALSNQKYRDFKKKFESVGLITGDIQINESASC LIMTTEILQSMIYGASEVLRDLEFVIFDEVHYINNEDRGHVWEEIVILLPQTVNIVMLSA TVPKPIIFANWVGRIKKRKMYVISTLKRPIPLQHYLYTPTNDKERGTLVLVLDSNEEFSL NGWHQATKNVQSVKSLQSKNTNTKDRKKRFSAKEQMMLWKNFVNYLKHNDKLPVVVFTLS RKRCDINANRLMNIQLTTLAEKMEVKRFYQHIMKYLKGSDKQLPQVCMMQNLLENGIGVH HSGILPILKETVEMLFQNGVVKLLFATETFAMGVNMPARTVVFDSITKYDGNGFRTLYPT EYIQMAGRAGRRGHDITGTVIVICNTEVPHFNELMPMMQGEAKTLESQFKVTYSMVLNLR RTNELVTVESMMRRSFKESYLILKEDKYQIDLRKVEEKLAALPPLTNIQKKLSGFYEIAI NYLQELRYLKPYMLESKKAINSLTKGRILIISYENHYRNLALLLDVLSRKQNGNQYKVLI LKDTNAQNVNNDRLLENSNNVICKEKSESWYSIISLTKKDIFVPSGVPSHEVITISAWNI LEITNCQVKVDCGMVLKDWEKRQISRFRHDLPGPTCQTAIQELMAISLNAANDDSILLPY VTMKVTENLNPRMKHLCKQKQALSSMKCIDILNFEEQFETVFYRNELETERKKLQLSLSD EGLSLYPDYINMVSLLKHLGYIDSDERIALKGRVALQIGINELLITELILKNVLTVLQPA EIAALLSALIFHQKSNSESTFPVDFHHLRKEHQIMQNVHAELQNLEQIYNLNTLQPLNFG LVEVVYEWAQSKSFAEIMQKIDVQEGIIVRCIQQLNETLQDVRNAAVTIGDPVLKEKMEE ASTAIKRDIVFAASLYTQD NT seq 3660 nt NT seq  +upstreamnt  +downstreamnt atggagctaccatttgagcttccacctatctggcctgatataaaaactgaattaaaggag tatattgaatgccctgaacggcttcccatacatcaacttgatcatgctcaatgttattgg cccagagaacctgatatttgttctttattagaatttgatttagcaccacttagtacaact ttaaaatttgatcgtgatccagtaacaggtcgtgttggacaaatgcaagaagttatttta aaaggagtcggagaaaatgcaagaaattcaatgtctatgaaacgtatacctggatctgtt acagatgatgttagaggcaatattactaacataccatttttgcctggtggatttgatgaa cctattgtaacagatgagatgacagaaaatattgattttgagaggaatttaaggacacta gcaaaaggatttagttctgggatagaatttgaagctgataattgtacgccaaagcaggaa tcaataaataaaccaactaaagtatcaaaagcaaaagtacaaattgaagatgatataaca agtaaaataaatttaatggctcttgtagaacaagaagagcgtgagcttaatctctggtca tctgtgcaagaactaaaagatgatgatgtacaggagtctccacaaatacctgcattagaa gatattccattgttaccaatagaaccagaaataccagttttaaacatttctgaagaacca tctaaaattattgaaatggaatgggcagaacaaatagatgtttctgtgccaataacagat tttgagaagaaaattcctgatccagcaatgacatttgaatatgaattggatactttccaa aaacaggctatacttaagttagaagagaattgtaatgtttttgttgcagcgcacacttct gcaggaaaaactactgtagctgagtatgctattgctttaactcagaaacatatgacaagg gtaatttatacttctcctatcaaagcactgtcaaatcaaaaatatcgtgattttaaaaag aaatttgaaagtgttggtttaataacaggggatattcaaatcaatgagagtgcatcttgt cttattatgactactgaaatattacaatcaatgatatatggagcatcagaagttcttagg gatttagaatttgtaatatttgatgaagtacattatattaataatgaggatcggggtcat gtatgggaagaaatagtgattcttttaccacaaactgtcaatatagttatgctgtcagca actgtgccaaaaccaataatatttgcaaattgggttggtcgtatcaaaaaacggaaaatg tacgtaatcagcactttaaagagacctataccattgcaacattatttgtatactcctact aatgacaaggaacgtggcacattagttttagttcttgattcaaatgaagaattttcattg aatggatggcatcaagcaacaaaaaatgttcaatctgttaaaagcctacaaagcaaaaac actaacacaaaagatagaaaaaagagattttctgcaaaagagcaaatgatgttatggaag aattttgtgaattacttaaaacataatgataaattgcctgttgttgtatttacattgtct aggaaacgttgtgatatcaacgcaaacagattaatgaatattcaactaactacattagct gaaaaaatggaagtaaaacgcttttaccagcatattatgaaatatttgaaaggtagtgat aagcaattaccacaagtttgtatgatgcaaaatcttttagaaaacggtattggtgtacat catagtgggatattgcctattttaaaggaaactgtagagatgcttttccaaaacggtgtt gttaagttattatttgcaactgaaacatttgctatgggagtcaatatgccagcacggaca gtggtatttgattcaataactaaatatgatggtaatggatttcgtaccttgtatcctacc gaatacatccaaatggctggacgtgctggtcgaagaggtcatgatataactggtacagtt atagtaatatgtaatacagaagttccacactttaatgaattaatgccgatgatgcaaggt gaagcaaaaacattggaatcacaatttaaagtaacatattctatggttttaaatttgaga agaacaaatgaactagttactgtagaatccatgatgcgcagatcatttaaagagtcatat ctaatattaaaagaagataaataccaaattgatttacgtaaagttgaagagaaattagca gcattaccaccattgacgaatatacaaaagaaattatctggtttttatgaaattgcaatt aattatttacaagaacttcgttatttgaaaccttatatgcttgaatctaaaaaagcaata aatagtttaactaagggtagaattttaatcatatcatatgaaaatcattatagaaactta gctctactattggatgtactttcacgtaaacaaaatggaaatcaatataaagtattgata ttaaaagatacaaatgcacaaaatgttaataatgatagattattagaaaattctaataat gtaatctgtaaagaaaaatctgaaagttggtatagtattatcagtctaaccaaaaaagat atatttgtaccaagtggggttccatcacatgaagttataacgatttctgcatggaatata ctagaaataacaaattgtcaagttaaagttgattgtggtatggtattgaaagattgggaa aaaagacaaatatcaagatttaggcatgatctacctggtccaacttgtcaaacagctatt caagaattaatggcaatatctttaaatgctgctaatgatgatagtatattattaccttac gttacaatgaaagtaactgaaaacctaaatcccagaatgaaacatttatgcaaacagaaa caagctcttagcagcatgaaatgtattgatattcttaactttgaagaacaatttgaaact gtattttatcgaaatgaattggaaacagaacggaaaaaacttcaacttagtcttagtgat gaaggattatctttatatccagattatataaatatggtttcacttcttaaacatctagga tatatagatagtgatgaaagaattgctttaaaaggcagagttgcattgcaaataggaatt aacgagttactcataacagagctaattctaaaaaatgttttaactgttttgcaaccagct gaaattgctgcactattatctgctttgatatttcatcaaaagtcaaattctgaatcgaca tttccagttgattttcatcacttgagaaaggaacatcaaattatgcaaaatgtacatgcc gagttacaaaacttagaacaaatttataatttgaatacactacaaccattgaattttggt ctggttgaagttgtttatgaatgggcacaatcaaaatcatttgctgaaataatgcagaaa attgatgtgcaagaaggtattatagttagatgcattcaacaacttaatgagaccttgcaa gatgtgagaaatgcagctgtgacaattggtgatccagttttaaaagaaaaaatggaagaa gcatccacagcaataaaacgtgacatagtttttgctgcgtccttatacactcaagattaa

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