Vespa crabro (European hornet): 124424679
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Entry
124424679 CDS
T09462
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
vcrb
Vespa crabro (European hornet)
Pathway
vcrb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124424679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcrb03041
]
124424679
Spliceosome [BR:
vcrb03041
]
Complex B
Other components
Prp19-related factors
124424679
Complex C
124424679
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
RRM_occluded
Torus
RRM_YTH1
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Nup35_RRM_2
zf-CCCH_10
RRM_3
zf-CCCH_12
DUF5092
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
124424679
NCBI-ProteinID:
XP_046820027
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All DBs
Position
6:7886946..7888662
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AA seq
415 aa
AA seq
DB search
MATSKTTNTYNRQNWEDAEFPILCQTCLGDNPYIRMTKEKYGKECKICMRPFTVFRWCPG
ARMRFKKTEVCQTCSRLKNVCQTCLLDLEYGLPIQVRDAALKIKDDLPRSDVNKEYYVQN
IDNEIGKIDATTPAGAVGKSAAASDLLMKLARTSPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGVNDPVADKLMRRAAAMPKLDPPEDKSITTLYIGNLG
DVLTEKQLRDHFYQYGEIRSVTMVPRQQCAFIQYTQRSAAEAAAERTFNKLILGGRRLTI
KWGRSQGRQTISAAEATREILEPVPGLPGALPPPPESMGNNFFNLQTTPGMIPPMMIPPP
PVAPQFMFPPQMAAAAAAAAATPIFPPGTTPIHYPSQDPSRMGASQGIGKPWPEE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcaacctcaaaaaccacgaatacatataatagacaaaattgggaagatgcggaattt
cccatattgtgtcaaacttgtttaggagataatccatatattcggatgaccaaagaaaaa
tatggaaaagaatgtaaaatctgcatgcgtccatttacagtatttagatggtgtccagga
gcaagaatgcgatttaaaaagactgaagtttgtcaaacttgcagtcgacttaaaaatgtg
tgtcaaacatgtttacttgatttagaatatggattgcctattcaagtacgcgatgctgca
ttaaagataaaggatgacttacctcggtctgatgtaaacaaagaatactatgtacaaaac
atagataatgaaataggaaaaatagatgctacaacaccagctggagctgttggtaaatct
gctgcagctagtgatttattaatgaaactggctagaacaagtccatattataaaaggaac
aggccacatatttgttctttctgggtaaaaggtgaatgtaaaagaggagaagagtgtcct
tatcgtcatgaaaaaccaacagatccagatgatccattagcagatcaaaacatcaaagat
cgttattatggagttaatgatcctgtggcagataaattaatgcgaagagcagcagcaatg
cctaaattagatccgccagaggataaatctataaccactttgtacattggaaacttgggt
gatgttttaacagagaaacaattacgggaccatttctaccaatatggtgaaatacgttct
gtaactatggtcccacgacaacagtgtgcctttattcaatacacacaaagaagtgcagct
gaagcggcagcagaaagaacattcaataaattaatattaggtggaagaagattaactata
aaatggggacgttctcaaggcagacaaactatttctgcagcagaagcaactagagaaata
ttggaaccagtgcctggtttacctggtgctttaccacctccgccagaaagtatggggaat
aatttctttaatctgcaaacaacacctggtatgataccaccaatgatgataccaccgcca
ccggtagcaccacaattcatgtttccacctcaaatggctgctgctgctgctgctgcagct
gcaactcccatttttccaccaggcacaacgccaatacattatcccagtcaagatccatct
agaatgggtgcatctcagggtattggaaaaccatggcctgaagaatag
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