Vespa crabro (European hornet): 124424981
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Entry
124424981 CDS
T09462
Name
(RefSeq) rootletin
KO
K16469
rootletin
Organism
vcrb
Vespa crabro (European hornet)
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
vcrb03037
]
124424981
Cilium and associated proteins [BR:
vcrb03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
124424981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
PUMA_CC
ERM_helical
ATG16
BRE1
Motif
Other DBs
NCBI-GeneID:
124424981
NCBI-ProteinID:
XP_046820633
LinkDB
All DBs
Position
6:9090913..9107217
Genome browser
AA seq
1971 aa
AA seq
DB search
MPRTLPKSTGQLTSKGPMERRRPPLLKGTSKIKESERKISKMEPTYSTVSCSGDDEETLS
PEALVRQNYELRHRLEEEAASYKRRLDTYRQAQQHQAALVSRLQAKVLQYKQRCSELESV
MAETAAIDNSKLSTQSQGTSALDVAHQTLREMREEQIHDLDTALKKLAEERKKCEKLLEL
NTSLKDQLEETNQTNEALTNDLQKLSNDWDILREELSIKEEEWKEEEQAFNDYYTSEHNR
LLNLWRDVVSVKRLFADIKSSTDRDLSKLSNQITSTTNDIVSTCNNTSIFMKMQTSIIQP
SVSQQIQESQMVIDIKSEMGLLKQQYDIAQNEIRMKDDRINQLIREIHALEERCGEAEAQ
TNNITRMQEDIEILQNALRDIAHTVIQDAETRDSESTQPPPHVHLSPTGPIPQRSPRRGA
RTNTIPAFAESTISAVQAALHKYQLTIHDLQVKLQTHKEQLTSFRKQSENAEENVRSLQI
KITEIVGELDATRSQCTQLVEEKEVLHKNLDTIKMEKNVLEKNRMEINAMVETLNADYEK
IQKANNKLQKLCDSLEDDKLYLQGELERLSKDAELRELSLRSEENRCSKMREELLTLQEE
LNKTYLTKDMLEQQKLETDALISQIEKSKGDIELELEHVLLEKSDIKEVLLKLESVCSNH
EQDKQRLQEELKKITEEKNKLANQCADQQGDLGSLRKELLQAEQTRLDLESEKVTLNEKV
KFLEIEKEKIEMELSQITRERSDLSNQLSVLARKKETLNEELMRIRQRLEQSNEMNSRIN
RSLEDLVKDNEEKQVLLETNEKELQRLQEQLASIRSEKETLEGVLYDTQTNLESTHIKKS
QLEKEQKELLIKQESLKGHIGRLTKDLENNQKQSQDIKQALAQQCCDQEANFQQAIFNLK
KQNEENVKKLNEEKEQLKITLEKRLQQSLLQLGGEKNDEINQLRQRVEELQQHIENLCQQ
HEEVLLRAENDKQQALLIAHHDQQALMEKLENALRDLEEEKGNLERLKRDTAIRSEQDRN
NLNQLRDNLNRFKTKLDETKLKGDEDKLKLELKIEELLKERESVQKESEELRIQLHVAED
KLDGLHNQLHETVRKLKDAENINDTLRKELVDVRRQLTDSTFEKEKYNTSNKELREHIKR
IEGEKREQGRALEETYQKIAALEDAKTAMEAERSRFQAQLRDMERDMLQVQQQFRLTQDE
LQKSNENNAQAQNNEKELQARLANETEERERLQLQLHQIKKQVLDLDNSLEVTRQELGKL
RSRGDEEDERWRSREQELLVRLEDSRCRERKLEDQKHNLEVCLADASQQIQELKARLGGS
EGRVRALDAQLSQLEVAKKEVEQKLSSIGLTLRRIAGIQMDGSVNMPFKLMSPSRRWSPA
RGHEHGDTSKDIVIDIDPEAVRRGMRLLMQQVAQIERERDDYKTELSSLKTQLGEYQENQ
TKVDEKLNNLLANMRIIQEEKNSLEAKMSQKETSHQSQMDILQQKTDECDQLREKVINLE
MIVNSDTEEKNLYEEKLDKMKQALNRMENERRNLQEELNKSEARATKLELQRMSLDGDLQ
RLQMMLQEREANIQKLQDRCETQNRTSAGLEERCASLKSTIEQLNLALEKSFNTESELKN
EINILQRNLMETTTCSQNNNEKLKQLQKQLSNTENERRVLAERLDSIQQSLSDLRHMNQN
LQDQVARLQTELANNEVQRSGLEAQLRLTKWPQESSSDKDEDLMRQLQIIQREKSEMRGK
LDALNDKVKLLETEKRTLENQVSTLKSVGTRSKSYERPEKAHIELLGSSYSFDNLEQENR
ELRLKIRRLETQLAEKETELIRAKSIYTHSSHSILESSRDRTGEIERLRAAQLQAEKLLE
AREQSHRQQVIRLENQIQLLREQLNQEIKRRQLYVLRSSRAGREMQQLRQALGDSLRTVA
QDPSLDAVLLEHEARKLDSTLTSTTSLPPSLALAPPSTYDRSSTPSRLEKT
NT seq
5916 nt
NT seq
+upstream
nt +downstream
nt
atgccacggacattacccaaaagtactggtcagttaacatcgaaaggaccgatggaaaga
aggagaccgccattactcaaaggaacaagtaaaataaaggagtctgaaagaaaaattagt
aaaatggaacctacgtatagtacagtcagttgttctggggatgatgaagaaacactttca
ccagaagctttagtcagacaaaattatgaattacgacatcgattagaagaagaagcagca
agttataaaagacgtttagatacttaccgacaagctcaacaacatcaagctgctcttgtt
tctcgtttgcaagctaaagttttacaatataaacaaagatgctcagaattagaaagtgtg
atggctgaaactgctgcaatagataatagtaaattatctactcaatcacaaggtacatct
gcattagatgttgcacatcaaacacttagagagatgcgtgaggagcaaattcatgattta
gatactgcattaaaaaaacttgcagaggaacgtaaaaaatgtgaaaaattattagaatta
aatacatccttgaaggatcaattagaagagactaatcaaacaaatgaagctctaacaaat
gatcttcaaaaactaagtaatgactgggatattttacgagaagaattgtccataaaagaa
gaagaatggaaagaggaggaacaagcttttaatgattactatacctctgaacataataga
ttattaaatctttggcgagatgttgtatctgtaaaaagattatttgcagatattaaatct
tctacagatagagatttatcaaaattaagtaatcaaattacatctactactaatgatatt
gtttctacatgtaataatacaagtatttttatgaagatgcaaacaagtataattcaaccg
tctgtatctcagcaaattcaagaatcacagatggtaattgatataaagtcagaaatggga
ttgcttaagcaacaatatgacattgcacaaaatgaaatcaggatgaaggatgatagaatt
aatcaattgatacgtgaaatacatgcattggaagaaagatgcggagaagcagaagcacaa
acaaacaatataacgcgtatgcaagaagatatagaaattttacaaaatgcattaagagat
atagctcatactgttattcaagatgctgaaactcgtgacagtgagagtacacaaccacct
ccacatgttcatttgtcacctactggaccaattcctcaaagatcaccaagacgtggagca
agaactaatactattccagcttttgctgagagtactattagtgccgttcaagctgcctta
cataaatatcaattaacaatacacgatctacaagtgaagttacaaactcataaagaacaa
ttaacatcatttcgtaagcaaagtgaaaatgctgaagaaaatgtacgaagtttacaaatt
aaaattacagaaattgttggtgaattagatgcaacacgttctcaatgtacacaactcgta
gaagagaaagaagttttacataaaaatttagataccataaaaatggaaaaaaatgtatta
gaaaaaaatagaatggaaatcaatgccatggttgaaacattaaatgcagattatgaaaaa
atacaaaaggctaataataaattacaaaaattgtgtgatagtttggaagatgataaattg
tatcttcaaggtgaattggaaagattatcaaaagatgcagaattacgcgaattgagtctt
cgttcagaagaaaacagatgcagcaaaatgagagaagaacttttaacgctacaagaagaa
ttgaataaaacgtacttaacaaaagatatgttggaacaacaaaaattagagacagatgca
ttaatctcacaaatagagaaaagtaaaggagacattgaattagaattggaacatgtatta
ttagaaaaatctgacataaaagaagtgttgttaaaattagagtcagtttgttcgaatcat
gagcaagataaacaaagattgcaagaggaattaaagaagatcacagaagagaagaataag
cttgctaatcaatgcgcagatcaacaaggagatttaggttccttaagaaaagaattactt
caagcggaacaaacgcgtttagatttggaatcggaaaaggttacgcttaatgaaaaagtt
aaatttttagaaattgaaaaggaaaaaattgaaatggaattgagtcaaataactcgcgag
cgtagcgatttaagcaatcagctttctgtacttgcacgaaaaaaagaaacattgaatgaa
gaattaatgagaataagacagagattagaacaatctaatgaaatgaattcaaggattaac
agaagcttggaagatcttgtaaaagataacgaagaaaaacaagtacttttagaaacaaat
gaaaaagaacttcaaagattacaagaacaattagcttcgatacgttctgaaaaggaaacg
ttagagggagttttatatgacacacaaactaatttagaatcaactcatataaaaaagtct
caattggaaaaggaacaaaaggaattattgataaaacaagaaagtttaaaaggacatatc
ggaagattaactaaggatttggaaaataatcaaaaacaatcgcaagatataaaacaagct
cttgcacaacaatgctgcgatcaagaggcaaattttcaacaagccatttttaatttaaaa
aaacaaaatgaagaaaatgtgaaaaaattaaacgaggagaaggaacaattgaagataacg
ttagaaaagagattacaacaatctttgttacaacttggcggggagaaaaatgatgagatt
aatcagttgcgacaaagagttgaggaattgcaacaacacattgaaaatttatgtcaacag
catgaagaagttttacttagggctgaaaacgataaacagcaagctcttttaattgctcat
catgatcaacaagcactgatggagaaattagagaatgccttgcgtgatttggaggaagaa
aaaggaaatttggaacgtttaaaaagagatacagcaattcgtagcgaacaggatcgtaat
aatttaaatcaattacgtgataatttaaatcgatttaaaacaaaattagacgagaccaaa
ttgaagggcgatgaagataaattgaagctcgaattaaaaatcgaagaacttttgaaagaa
cgtgaatccgttcaaaaggaatcggaagaacttagaatacaattgcatgtggcagaagat
aaattagacggacttcataatcaattgcatgagactgttagaaaattgaaagacgccgaa
aatattaatgatacattacgcaaagaattggttgacgttcgacgacaattaacggattca
acatttgaaaaggaaaaatataatacaagtaacaaagagttaagagaacacattaaacgt
atagaaggtgagaaacgtgaacaaggaagagcattagaggaaacgtatcaaaaaattgca
gcattagaggatgcaaaaacggcgatggaggcagaaagatctcgttttcaggctcagctt
cgagatatggaacgtgatatgttacaagtacaacaacaatttcgtcttacgcaagacgag
ttacaaaaatctaatgaaaataatgcacaggcacagaataacgagaaagaattacaggct
agattagccaatgaaacggaagaacgagaacgtttgcaactacaattgcatcaaattaaa
aaacaggtattggatttagataatagtttagaagtgaccagacaggaattaggtaagtta
cgatctcgtggagacgaagaggatgaaagatggagatcccgtgaacaagaattattggta
cgattggaggatagtcgttgccgtgaaagaaaactagaagatcaaaagcataatttagaa
gtatgcttagccgatgcttctcaacagattcaagaacttaaggcacgtcttggaggatcc
gaaggaagggtaagagctttggatgctcaattatctcaattagaagttgctaaaaaagaa
gtggaacagaaattgagtagcattggtttaacattacgtcgtatagctggcattcaaatg
gacggttccgtaaatatgccgtttaaattaatgagcccttcgagaagatggagtcctgcg
agaggacacgaacacggtgatactagcaaagatattgtgatcgatattgatccagaagct
gtaagaagaggcatgagattacttatgcaacaagtggcacaaatcgaacgtgaaagagat
gattataaaaccgaattgtctagtttaaaaacgcaacttggcgagtatcaagaaaatcaa
actaaagtcgatgaaaaattgaataatttattagctaatatgaggattatacaagaggag
aaaaattctttggaggctaaaatgtcccagaaagaaacaagccatcaaagccaaatggac
attttacaacagaagacagacgagtgcgatcaactccgtgaaaaagtgataaatcttgaa
atgattgttaattctgacacagaagaaaagaatttatatgaagaaaaattagataagatg
aaacaggcattgaacagaatggaaaatgaaagacgtaatttacaagaggaacttaataaa
agtgaagctcgtgcaacgaagttagagttacaaagaatgtcattggatggtgatcttcaa
agattacaaatgatgctgcaagagagagaagcaaatatacagaaattacaagatcgatgc
gaaactcaaaatcgtactagtgctggtttagaagaacgttgtgcatcgttaaaatctacg
atagaacaattgaatcttgcattggaaaaatcattcaatacagaaagtgaattgaaaaat
gaaattaatattttacaacgtaatctcatggaaactactacgtgttcacaaaataataat
gaaaaattgaaacagttacagaaacagctttcaaatactgaaaatgaacgcagagtcttg
gccgaacgtttggattctattcaacaatctttgagtgatttaagacacatgaatcaaaat
cttcaagatcaagttgcaagactgcaaactgaattagctaataatgaagttcaacggtca
ggtttagaagcacaattgagattaactaaatggccgcaagaaagtagttcggataaagac
gaagatttgatgagacaattgcaaatcattcaaagagaaaaaagtgaaatgcgaggaaaa
ttagatgcgctcaatgacaaggtgaagttattagaaactgagaaacgtactttggaaaat
caagtatcaactttgaaatctgttggtactcgtagtaaaagttatgaacgtcctgagaag
gcacatatcgaattattaggtagctcttacagttttgacaatttagaacaagaaaataga
gagttaagattgaaaattcgaagattagaaacgcaattggcagaaaaggaaaccgaattg
ataagagctaaatcgatttatacgcattcatcacattctatattagaatccagtagagat
agaacaggagagatagaacgattgagagcggcacaattacaagctgaaaagttattagag
gcgagggaacaaagtcatcgtcaacaagttatacgccttgaaaatcagattcaattattg
cgagagcaactcaatcaagaaattaaaagacgtcaattatacgttcttcgaagttcacga
gctggtagggaaatgcaacaattaagacaagcattgggtgattcattaagaactgtagca
caagatccatctctcgatgcagtattattagaacacgaagcacgaaaactagatagtaca
ctcacgagtacaactagtttaccaccttcattagcattggctccaccgtcaacgtatgat
agatcttccactccatcacgattagaaaagacataa
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integrated database retrieval system