Vespa crabro (European hornet): 124425071
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Entry
124425071 CDS
T09462
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
vcrb
Vespa crabro (European hornet)
Pathway
vcrb03013
Nucleocytoplasmic transport
vcrb03015
mRNA surveillance pathway
vcrb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124425071
09122 Translation
03013 Nucleocytoplasmic transport
124425071
03015 mRNA surveillance pathway
124425071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcrb03019
]
124425071
03041 Spliceosome [BR:
vcrb03041
]
124425071
Enzymes [BR:
vcrb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124425071
Messenger RNA biogenesis [BR:
vcrb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124425071
Spliceosome [BR:
vcrb03041
]
Complex C
Other components
EJC/TREX
124425071
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
124425071
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
124425071
NCBI-ProteinID:
XP_046820839
LinkDB
All DBs
Position
1:complement(8006138..8011204)
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AA seq
424 aa
AA seq
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MADNDDLLDYEDEEQTEQVVDGSGDVPAKKEVKGTYVSIHSSGFRDFLLKPEILRAIVDC
GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLELTENQVYVLVMCHTR
ELAFQISKEYERFSKYMPYVKVAVFFGGLPIQKDEEVLKNTCPHIVVGTPGRILALVRNK
KLNLKHLKHFILDECDKMLELLDMRRDVQEIFRSTPHGKQVMMFSATLSKEIRPVCKKFM
QDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMAL
AQLLTEQNFPAIGIHRGMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYD
MPEDSDTYLHRVARAGRFGTKGLAITLVSDENDAKILNDVQERFDVNITELPDEIDLASY
IEGR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcagataacgatgatcttttggattacgaagatgaggaacaaactgaacaagtagtt
gatggaagtggagatgtccctgctaagaaggaagtaaaaggcacatatgtgtctattcac
agcagtggttttagggattttcttcttaaaccagaaatattaagagcgattgttgattgt
ggattcgagcatccttctgaagtacaacatgaatgtattcctcaagctgtacttggtatg
gatattctgtgtcaagcaaaatctggtatgggaaagaccgctgtatttgtattagccaca
ttgcaacagttggaattaacagagaaccaagtctatgtcttagtaatgtgtcacactaga
gagctagcatttcaaattagtaaagaatatgagagattcagcaaatatatgccttatgta
aaggtagccgttttttttggtggattaccaattcaaaaggatgaagaagttttgaagaat
acttgccctcatattgtagtaggcactccaggtcgtattcttgctcttgttcggaataaa
aagttgaaccttaaacatttgaagcacttcatacttgatgaatgcgacaagatgcttgaa
ttgttagacatgcgcagggatgtacaggagatatttagaagcacaccacatggtaaacaa
gtcatgatgttcagcgctacactgtccaaagagatccgccctgtctgcaagaaatttatg
caagatcccatggaagtctatgttgacgacgaagcgaagctcacgttacatggcctgcaa
caacattacgtgaaactcaaagaaaatgagaaaaacaagaagctttttgaattgttagat
gttcttgaattcaatcaggtagtgatatttgtaaaatcagtgcaaagatgcatggctctt
gcacaacttttaacagaacaaaattttcctgctattggtatccacagaggaatgacgcaa
gaagaacgtttatcaagataccaacaattcaaagatttccaaaaacgaattttagtagcc
actaatttattcggacgaggaatggacattgaacgtgttaatattgtatttaattatgac
atgcccgaagattctgatacatacctccacagagtagcacgagctggacgttttggtaca
aagggtcttgctatcacgttagtaagcgatgaaaatgatgccaaaatattaaacgatgta
caagaacgttttgatgtaaacattacagaattgccagatgaaatagatcttgcatcatat
attgaaggacgataa
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