Vespa crabro (European hornet): 124425225
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Entry
124425225 CDS
T09462
Name
(RefSeq) cholesterol transporter ABCA5-like isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
vcrb
Vespa crabro (European hornet)
Pathway
vcrb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124425225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcrb02000
]
124425225
Transporters [BR:
vcrb02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
124425225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
AAA_23
RsgA_GTPase
AAA_29
AAA_30
TsaE
MMR_HSR1
DLIC
RIC3
Motif
Other DBs
NCBI-GeneID:
124425225
NCBI-ProteinID:
XP_046821258
LinkDB
All DBs
Position
6:8509610..8542183
Genome browser
AA seq
1737 aa
AA seq
DB search
MPRIRGRRTRHEIPRTSVSRRMDSCGVYLSQLRAMLVRNLLLKKREKRKTIAEIFLPLYT
LGILIVIKVLIPNPNYPAMTTQRHEENIFELFNGYKNNTIAVVPNSTETLTFLNSMNNLW
LSMWDFPGKLPLNFMIFDTKDDLQAAYWRDPYSVPLAVIFEDSQPITQRLLYEIRTNPSY
TSPPSPTELYSAPVTCRKDTSHWMGGVLSIETGGSCPVNNYLDSGFLALQMLMDITKIRL
DTQNNDVTIPDIKLEMFPKEAFTADWMLAFRVIIPLYMVLALSQFITYLLILIVGEKENR
IKEGMKIMGLKDSVFWMSWFIIYSIFVLLLSAVGVVLLFTLQMFQHTHFLPIFLLVVLYS
FSIIMFAFMITPFFDKSRTAGVLGNFAVTILSLMYFIQVFVDDSSSISFWLVSLLSPTGV
ALAMDKALVLDLQGQGVNFDNLWCGPGIPFGGSLIMMTLDIFLYACLAYYLDSVIPSEYG
TKRSPWFCFTPGFWCQRKVQRVPSSNGESNSFIPGEETNRDVEPVVREMKGREAIRIIDL
FKSYQKCRKPETKAVNGINLTIYEGQITAILGHNGAGKTTLFNILTGLTSPTAGTALIFG
YDVRDSNDMQMIRSMTGVCPQHDILFDLLTPREHLEFFAAVRCIPKSMIEHEVKKTLKDI
DLVEKADTFAKYLSGGQKRKLSVGIAIIGDPKIIILDEPTAGVDPYSRRQMWSFLQSRRH
GKVILLTTHFMDEADILADRKAVISKGRLRCCGSSLFLKNKFGIGYHLTLVLEGNAREHA
IARLVSSHVTKAEKARRHGRELSFILPHNSVENFASLFSAIEHEIKTRSSRLGISSYGVS
MTTLEEVFLHLEKDEETECTMDNLSKKMVRNRALSRSLSLQSKSTSYQSLQNEGVTVQND
GQAKGAGDLPDGIHNDRNPPILGLGLDPIKIRPNFLQILYAMLRLRILRLFRNIQLLYFT
IVAPLALIILGLYINSIQTVDIKMQSLQLNSDTYGNETKILYLNNTDVDITPLIESISQD
VKHIDEYDGNYVNLLKSAPHVAAFNINDYSFPKMNLTIVYNDTMQHSLPILLNVLLNTYY
RLVAGRDDVQQIEIKTHPFQQTSQPQEFNIGVASSALFIGMDFVLLPITLAVDMVYDREI
KAKNQLRVNGLSFPMYFLTYFIVLVGLMTFICSCIIGIIFLFDVPSLQEPPALITLGALL
MLYCPSSILFSTCWSYIFDKMDSAQSILPNIATFFGLIPFLLVVILDMLGVGGTAAFALH
VVFSLLNTMYVPYAAVYYVDRVHLMCSINAACHHLTMSDYLTTEIILMAVGVLLHCPLWF
FVLLLLDIKKSGGNISDFFKHFLRNGGSIGEEIMENSDVGEHEDADVKTERQRVFNLITS
PSVQQSSVVLVQNLRKEYHQRESTVSCSCCNKREEETTSQMQRKVAVRNLSLAVEPGEVF
GLLGHNGAGKTTTMKIIIAEEAATRGRVQIGGHNIHSHMEEAFRQMGYCPQHDAQWKNIT
VREHLECYAAIRGVPWGEINRIVDLYLTGLQIHEHADKQTQECSGGTRRKLSFAMAMVGG
PKVVLMDEPSTGMDPRSKRFLWDTILASFQGGRGAILTTHSMEEADALCSRVGIMVKGEL
RCVGSTQHLKNLYGAGYTLEMKLLGGDCTPTTPSGDRLSALKEFVAGLFPDATLEESFAD
RLVFAVPQHAVNSLAECFMQLEKAKQELDIEEYSFSQTTLEQVFLKFSHYDESNSGE
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atgccacgaatccgaggaagaaggacgagacacgaaataccaaggacgagtgtatctcgc
aggatggattcgtgcggggtctacttgtctcagctacgagcgatgctcgtgagaaatctt
cttctgaagaaacgtgaaaaacggaagactatcgcggagatcttcctgcctctttatact
ctagggattctcatagtgataaaggtgttgatacctaatccaaattatcccgcgatgacg
acgcagaggcatgaagagaatatattcgaattattcaatggttataaaaacaatacgata
gccgtggtacctaattcgacggaaactctcacattcttaaattcgatgaacaacctttgg
ctgtccatgtgggattttcctggcaaattacctttaaattttatgatattcgatacgaag
gatgatctacaggcagcttattggagagatccatatagcgtacctttggctgtgatcttc
gaagactctcaaccgatcactcaacgtcttctatacgagattagaacaaatccttcgtat
acatcgcctccttcgcctactgaactttattccgctccggttacttgccggaaggacacc
agccattggatgggaggcgttctgtcaatagaaactggcggatcatgtcccgtgaataac
tatttggattctggcttcctagcgttacaaatgctaatggatattacgaagataaggctt
gacacgcaaaacaacgacgtaaccattccagatataaaattagaaatgtttccgaaagaa
gcattcacagctgattggatgttggcttttagagtcattattcctttgtacatggtatta
gcactttcacagttcattacttatctcttgatactaatagtcggtgaaaaagagaacagg
attaaagaaggaatgaaaataatgggcctgaaggattctgtattttggatgtcttggttc
attatctacagcatctttgtcttgttactttctgccgttggagtggtattactcttcact
ctacaaatgtttcagcatacacactttttaccgatatttcttttggtcgtactttatagt
ttttccatcatcatgtttgccttcatgataacgccattctttgataaatctcgtactgcc
ggtgtccttggaaactttgcagtaacgatattaagtttgatgtacttcattcaagtcttt
gtagacgattctagctcgatctcattttggcttgtatcacttttaagtccaacgggtgtt
gcattggctatggataaggccttggtcttagatttacaaggacaaggagtgaatttcgat
aatctttggtgtggtcctggtatacctttcggtggaagtctcattatgatgactttagac
atattcttatatgcttgcttagcctattatttggactcggttataccaagcgagtatggc
acgaagagatcaccgtggttctgtttcacacctggattttggtgtcaacgtaaagttcaa
agggtaccatcgtctaacggcgaatctaattcttttatacccggcgaggaaacaaataga
gacgtggaaccagttgtacgtgagatgaagggaagggaagcaattagaatcatagatttg
tttaaatcttatcagaaatgtcgtaaacctgaaacaaaggcagttaatggtatcaatcta
acgatttatgagggacaaataacagcgatattgggacataatggggctggtaaaacaacg
ttgtttaatatactcaccggattgacatcgccaacagccggtacggctttgatatttgga
tatgacgtgcgagattcaaacgatatgcagatgatcagaagtatgacaggtgtatgccct
cagcatgacattctgtttgatttattaacgccaagagaacatctagaattttttgccgct
gtacgttgtattccaaaatcaatgatcgaacacgaggtaaagaaaacgttaaaggacata
gatttggttgaaaaagcggatacttttgcaaaatatttaagcggtggccagaagagaaag
ctctcagtaggtatcgccattatcggtgatcctaagatcattatccttgatgagcccaca
gctggagtggatccatactcgagaagacaaatgtggtctttcctgcaatccagaagacac
ggtaaagtcattcttttaacgactcacttcatggacgaagcagacatattggctgacagg
aaggcagttataagtaaagggagattgagatgttgcggtagttcgttgttcttaaaaaat
aaattcggtatcggttatcatttaactctcgtactagaaggcaacgcaagggaacatgca
atagcacgattagtatcgtctcatgtgacgaaagccgaaaaagcaagacgtcacggtcga
gaattgagcttcatcttgcctcacaattctgtggaaaatttcgcctcacttttttcggct
atcgagcatgaaatcaaaacgagatcgagtagattgggtattagtagttatggagtatct
atgacgaccctggaagaagtctttttacatctggaaaaagacgaggaaacggaatgtacc
atggacaatctgtcaaagaaaatggttcgtaatcgtgcacttagtagatcgttgtccttg
cagtcgaaaagtacatcgtaccagagtttacagaacgaaggtgttaccgttcaaaatgat
ggtcaagcgaaaggagcaggtgatctaccagatggaattcacaatgataggaatcctcct
attctcggccttggcttagaccccatcaaaattcggcctaacttccttcaaattctttat
gccatgcttcgcctaaggatactcaggctgtttagaaacattcaactattatactttacc
atcgttgctcctcttgctctaataatccttggtctctatataaacagtattcaaactgtt
gacattaagatgcaatcacttcaacttaatagtgacacctatggcaatgaaactaaaatt
ttatatttgaataataccgatgttgacataacgcctttgatagagagtataagtcaagat
gtaaagcatatcgatgaatacgatgggaattacgttaatttgttaaaaagcgcaccgcac
gtagcagcatttaatatcaatgattatagctttccaaagatgaatttaacaatcgtatat
aacgatacgatgcaacattctttacccattttattgaatgtactgttaaatacttattac
agattggtagctggtagggacgatgttcaacaaattgaaataaaaacgcatccgtttcaa
cagacatcacagccacaagaatttaacattggtgttgccagttcagcattattcatagga
atggattttgttttattaccaatcactttggcagtcgatatggtttatgatcgagaaata
aaagcgaagaatcaattgcgcgtcaacggcctgtcatttcctatgtacttcctcacatat
tttattgtcctcgtcggcctgatgacatttatttgttcatgtatcattggtattatattt
ctctttgacgtgccttcgcttcaagaaccaccagcactcattactcttggtgccctttta
atgttatactgcccatcgtccattcttttttcgacatgttggagttacatttttgataag
atggactccgcacaaagtattttacccaatattgctacgttctttggactgatacctttt
ttgcttgtcgtgatcttagatatgctaggtgtcggtggtactgcagcgttcgctttgcac
gtggtcttttctctattaaataccatgtatgtgccctacgcagcggtgtactatgtagat
cgcgttcatttaatgtgctctattaatgctgcctgccatcatttaactatgtcggattat
cttactacggagatcatattgatggctgttggtgtattattacattgtccattatggttc
ttcgtattgctcttattggatatcaagaaaagcggcggaaacattagcgatttcttcaag
cacttcctgagaaatggtggctcgatcggtgaggagataatggagaattcggatgtaggt
gagcacgaagatgctgacgtaaaaactgaaagacaaagagtattcaatcttattacgtca
ccttccgttcaacaatcatcagtggtattggtacagaatctacgaaaggaatatcatcaa
cgagaatcaacagtttcttgtagctgttgtaacaaacgagaagaagagacaacatctcaa
atgcaacgaaaagtcgctgtaagaaatttatcattggccgttgaaccaggtgaagtattt
ggacttctgggtcataatggtgctggaaaaactactacgatgaagattattattgcggag
gaagcagcgacacgtggtagagtacaaattggcgggcacaatattcattctcatatggag
gaagcattcagacaaatgggatattgtccgcaacacgatgctcaatggaaaaatattact
gtacgagaacatttagaatgttacgcagctattcgtggtgtaccttggggagagattaat
agaatcgtcgatctctatttaaccggtcttcagattcatgaacatgccgataaacaaact
caagaatgctcaggtggtactagaagaaagcttagctttgcaatggcaatggttggagga
ccaaaggttgttttaatggatgaacctagtacgggtatggatcctagatcaaaaagattc
ttatgggataccatccttgctagtttccagggtggccgaggagcaatccttacaactcac
tcgatggaagaagccgatgcattatgctccagagtcggtataatggttaaaggtgaatta
agatgtgtaggttcgacgcaacacctgaaaaatctatacggtgctgggtacactttagag
atgaaacttttgggtggcgattgtaccccaactacgccttccggtgatagattatctgca
ttaaaagaattcgttgctggtctctttcctgatgcaacgttagaagaaagctttgcagac
agattggtctttgccgttcctcaacacgcagtgaactcgctggccgagtgttttatgcag
ttggagaaggccaagcaggaactagacatcgaggagtatagtttcagtcaaactaccctg
gaacaggtgtttctcaagttctctcattacgacgagagcaatagtggtgaatga
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