Vespa crabro (European hornet): 124425852
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Entry
124425852 CDS
T09462
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
vcrb
Vespa crabro (European hornet)
Pathway
vcrb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124425852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcrb03041
]
124425852
03009 Ribosome biogenesis [BR:
vcrb03009
]
124425852
Enzymes [BR:
vcrb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124425852
Spliceosome [BR:
vcrb03041
]
Complex A
U1 snRNP components
U1 related factors
124425852
Complex B
124425852
Ribosome biogenesis [BR:
vcrb03009
]
Eukaryotic type
Pre-60S particles
Helicases
124425852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
124425852
NCBI-ProteinID:
XP_046822785
LinkDB
All DBs
Position
8:complement(1518899..1523906)
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AA seq
614 aa
AA seq
DB search
MYNRDRDQGRSRRGGGGRGSNRGSSDNGRGNVNSRFNGRGRGSSVSTGRGGLKGKQPGGS
LRKVNWDARSLEPLRKDFYIEHPAVRNRSKEEVAQFRENAEITVKGVNVPNPIQYFEEGN
FPPYVMEGIRRQGYSQPTAIQAQGWPIALSGRDLVAIAQTGSGKTLGYILPAIVHIIHQP
RLSKGDGPIALILAPTRELAQQIQEVANCFGESAAVRNTCIFGGAPKGPQAHDLERGVEI
CIATPGRLIDFLERETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSA
TWPKEVRALAEDFLTDYTHLNIGSLTLSANHNIVQIVDVCQEFEKDIKLYRLLQEIGTEK
ENKTIIFVETKRKVDDITRNIRRDGWQALSIHGDKNQQERDHVLQEFRSGRAPILVATDV
AARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTSHNMKHAGDLIEVL
REAGQNINPRLSEMAEMAKSGNFGNRSAKRFCSSSGSLDRSGGRRGNIDCRGGRGSGTLR
GRGSIRSNNSYQSGSSGYSGSDYTSYSNLKQNNSISPNTGYGYTTQRSYSQNMSQVYGGN
DNYGNNYQYRGAAY
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtataacagagatagagatcaaggcagaagtcgcagaggaggtggtggtagaggaagt
aatagaggaagtagtgataatggtcgaggaaatgttaatagtcgatttaatggacgagga
agaggaagtagtgttagtactggacggggtggactaaagggaaaacaacctggaggaagt
ttaaggaaagtaaattgggatgctcgctctttagaaccattacgaaaggatttttatatt
gaacatcctgctgttagaaacagatcaaaggaagaagttgcacaatttcgtgaaaatgca
gaaataactgtaaaaggagttaatgttcctaatcctattcagtattttgaagaaggtaat
tttccaccttatgtaatggaaggaatccgtagacaaggttattcacaacctacagcaatt
caagcacaaggatggccaatagcgcttagtggtagagatcttgttgcaattgcacaaact
ggttctggaaaaacacttggatatattttacctgcaattgtgcatattatacatcagcca
cggttaagtaaaggtgatggtccaattgcattgatattggctccaacgagagaacttgca
caacaaattcaagaagttgctaattgtttcggtgaatcggcagctgtaagaaacacatgt
atttttggtggtgcacctaaaggaccacaagctcatgatttagaaagaggtgttgagata
tgcattgctacaccaggtagacttattgactttttggagagagaaactacaaatttacgc
agatgcacatatttagtgcttgatgaagctgatagaatgttagacatgggatttgaacct
caaattcgtaaaattattgaacaaatacgacctgacaggcaggtattgatgtggtctgca
acatggccaaaagaagttcgagctttggctgaagattttctaactgattatacccacctt
aatattggatcattgactttatcagccaatcataacattgtacaaattgtagatgtttgt
caagaatttgagaaagatattaaattatataggctacttcaagaaattggaactgaaaaa
gaaaataaaactataatattcgtagaaacaaagcgaaaagttgatgatattacaagaaat
attagaagagatggatggcaagctttaagcattcatggtgataaaaatcaacaggaaaga
gatcatgtgttgcaggaatttcgtagtggacgagcaccgatcttggttgcaacagacgta
gctgcaagaggtttagatgtggatgatgtcaaatatgtaataaattttgactacccatca
tcatcagaagattatatacatagaattggtcgtactggtcgtagacgacaaacaggaaca
gcttatgcatttttcaccagtcataatatgaaacatgcaggagacctaatagaagtgcta
cgagaagctggacaaaatattaatccaagattgagtgaaatggcagaaatggccaaatca
ggaaattttggaaacagaagtgctaaacgtttttgtagttcatccggaagtttagacaga
agtggtggaagacgtggaaatattgattgtagaggaggacgtggtagtggtactctcaga
ggacgaggaagtattcgttctaacaattcttaccaatctggatcaagtggttactcagga
tcagattatactagttatagtaacttaaaacaaaataattcaattagtccaaatactggt
tatgggtatactacacagagaagttatagtcaaaatatgtctcaagtttacggaggtaat
gataattatgggaataattatcaatatagaggtgctgcatattaa
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