Vespa crabro (European hornet): 124426031
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Entry
124426031 CDS
T09462
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
vcrb
Vespa crabro (European hornet)
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vcrb01009
]
124426031
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcrb03019
]
124426031
04131 Membrane trafficking [BR:
vcrb04131
]
124426031
03036 Chromosome and associated proteins [BR:
vcrb03036
]
124426031
Enzymes [BR:
vcrb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
124426031
Protein phosphatases and associated proteins [BR:
vcrb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124426031
Messenger RNA biogenesis [BR:
vcrb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
124426031
Membrane trafficking [BR:
vcrb04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
124426031
Chromosome and associated proteins [BR:
vcrb03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
124426031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
STAT_int
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
124426031
NCBI-ProteinID:
XP_046823191
LinkDB
All DBs
Position
8:6224546..6230954
Genome browser
AA seq
1156 aa
AA seq
DB search
MYSKTGLEGNLFDAVRQLAESEIQLIKAIEESTMDCQKNTTDMKSTTKKKNTKKSSKLSN
IRPSAALLAAKQEAVQRKILQNKKSNTNFVYDIYQKIRDAYSIVHKETGIVYDHSMEEHK
CLWDENYPECPNRLIRILERCKELELLNRCKLISTRFCTENDILQMHSQKQIDILKSTSG
CMDLDKLETLSSKYDAIYIHPSTYKLSLLAVSSTISLVESICKGDIQNGMAIIRPPGHHA
MKSEYCGYCFYNNVAIAAKKALNDNLANKILIVDWDVHHGQATQQMFYDDSRVVYFSIHR
YENGTFWPNLEESNFHYIGKGLGEGYNFNIPLNKTGMTNADYIAIFQQVLLPMAYEFQPD
LIIVSAGYDAALGCPEGEMEITPACYAHLLSSLLSLAAGKVAVVLEGGYCLKSLAESAAL
TLRTLLGDPCPMLQTLQLPSLSIRDTILNTIYVHKQFWKCYQYQDQYSINNRIDKKEENN
DQHLPVVNYKGEVYKPDIYETRNCYPVQSKNTLEALDKKLDSLIKFTNLSKAPNKVCIVY
DNRMLKHCDTINNTHPEKPNRILSIYKKHEEHGLLDRCYLQQGRVATEEEILLAHSQDYI
HAIKKTETFKTKDLERQALKYNSVYLHNETWFSACVSVGSLLQIVDNVLNGQAQSGVAVI
RPPGHHAEPNLACGFCIFNNVAVAAKYAQNIHNVKRILIVDWDVHHGNGTQSIFENDPNV
LYISIHRYDNGSFFPHSKYGNYTSVGSGLGEGYCINIPWNKKGMGNAEYIAAFQQVVMPI
AYQFNPDLVLVSAGFDACIGDPLGGCTVTPEMYGHLTHWLSSLANGRIILSLEGGYNINS
ISHSMAICTKALLGDPLPLLDASLIPCSSAIHSINNVLKTQKKYWPNLMFNLSLPKENLT
KIATYKKMNEQVRNSKFNEHSESKIALEGIENEKLDIKLSFNKNSMNLVTDEEILKLQNE
IENIKIKNSKTMKEMTTTEIARTCVNKDQQKERQRRETAGSSNNASGSNDFGENRGIYDG
AAATSLTDYLSDNLQALIAGEMFAVIPLRDCPHLDTVNDVPSRGIDVHLPCMECGSNVEN
WICLQCYTVHCARNINQHALLHADETQHPLTLSFSDLSVWCYGCEAYIDNPRLYAARNAA
HQSKFNQDSPWTYEGQ
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgtattcgaaaactggattagagggaaatttgtttgatgctgtgaggcaactagcagag
agtgaaattcaacttattaaagctattgaggaatctaccatggattgtcaaaaaaatact
acggatatgaaatctacaacaaaaaaaaagaataccaagaaatcatctaaactttcaaat
attcgaccgtctgccgctttattggctgcgaaacaagaggcagtacagcgcaaaatatta
caaaataaaaagtctaacacaaactttgtatacgacatttatcaaaagataagagatgca
tatagtattgtgcataaggaaactggtattgtttatgatcattctatggaggaacataaa
tgtttgtgggatgaaaattatcctgaatgtccaaatagattaataaggatcttagaaaga
tgtaaagagttagaattgttgaatagatgtaaattaatttcaaccagattttgtacagaa
aatgacatacttcaaatgcatagccaaaaacaaatagatatattaaaatcaaccagtgga
tgtatggacctggacaaattggaaacattgtcttctaaatatgatgctatatatatacat
ccatccacttataaattatctttattggctgtgagttcaacaataagtttagtagaaagt
atttgtaaaggagatatacaaaatggcatggccattatcagaccacctggacatcatgca
atgaaatctgaatattgtggatattgtttttataataacgtggctattgcggcaaaaaaa
gctttaaatgataatttagcaaataaaattcttattgttgattgggatgtacatcatgga
caagctactcaacaaatgttttatgatgattcacgtgtagtttatttttcaatacatcgt
tatgaaaatggaacattctggcctaatttagaagaatctaattttcattacattggtaaa
ggtttgggagaaggttataattttaatataccacttaacaaaactggtatgacaaatgct
gattatattgcaatatttcaacaagttttattaccaatggcttatgagtttcaacctgat
ctcataatagtctcagctggttatgatgcagctttgggatgcccagagggtgaaatggaa
ataacacctgcatgttatgctcatctattgtcatccctattgagtttggcagctggaaag
gtagctgtagtattggagggtggttattgtttaaagtcattggctgaaagtgctgcacta
actctgcgaacattattaggtgatccatgtcctatgttgcaaacattacaattaccatca
ttaagtatacgcgatacgattttaaatactatctacgttcataaacagttttggaaatgt
tatcaatatcaagaccaatatagtattaataatagaattgacaaaaaagaagaaaataat
gatcaacatttgcctgttgttaattacaagggagaagtgtacaagccagatatttatgaa
acaagaaattgttatcctgtacaaagtaaaaatactcttgaagcattagataaaaaatta
gattcattgataaaatttacaaatttatccaaagcacctaacaaagtatgtattgtatat
gacaacaggatgttgaaacattgcgatactattaataacacacatccagaaaagccaaat
cgaattttaagcatttataaaaaacatgaagaacatggtttattagaccggtgctattta
caacaaggaagagtggcaacagaggaagaaatattattagctcattcacaagactacatt
catgcaataaaaaagacagaaacatttaaaaccaaagatttggaaaggcaagcattaaaa
tataattctgtttatttgcataatgaaacatggttttctgcttgtgtatctgttggctca
ttacttcaaattgtggacaatgtattaaatggacaagcacaatctggagttgcagtaata
agacctccaggacatcatgcagaaccaaatctggcatgtggtttttgtatttttaataat
gttgcagtagcagcaaaatatgctcaaaatattcataatgtaaagaggatattaatagta
gattgggatgtacatcatggaaatggaactcaatctatttttgaaaatgatccaaatgta
ctttatatatccattcatcgttatgacaatggaagttttttcccacattctaaatacggt
aattatacttctgttgggtcagggttaggagaaggttattgtataaatataccatggaac
aaaaaaggaatgggaaatgcagaatatatagctgcatttcaacaagttgttatgccaatt
gcttatcaattcaacccagatttagttctagtctctgcaggctttgatgcttgtattgga
gatccactagggggatgtacagtgactccagaaatgtatggacatttaacacattggtta
tcttctttggcaaatggacgtattatacttagtctggagggaggttataatataaattca
atttctcattcaatggcgatatgtacaaaagcgttacttggtgacccattacccctgcta
gatgcttcgttaataccatgttcaagtgcaatacattctataaataatgtgttaaaaacg
caaaaaaaatattggcccaatttaatgttcaatttatcattgccaaaagaaaatctcacg
aaaattgctacttataaaaagatgaatgagcaagttagaaattctaaatttaatgaacat
tcagaatccaaaattgctttagagggtattgaaaatgaaaaattggatatcaaactttct
tttaataaaaatagtatgaatttagtaacggatgaagaaatattgaaacttcaaaatgag
atagaaaatataaaaattaagaattcaaaaactatgaaggaaatgacaactacagaaata
gctagaacatgtgtaaataaggatcaacaaaaagagagacagagaagagaaactgcagga
agttctaataatgcaagtggtagtaatgattttggagagaatagaggaatttatgatgga
gctgcagcaacaagtttgaccgattatctctctgataatctgcaggcattaatagctgga
gaaatgtttgctgttataccattgcgcgattgtccacatctagatactgttaatgatgta
ccatctcgtggtattgatgtacatttaccatgtatggaatgtggtagcaatgttgaaaat
tggatttgtctacaatgttacaccgtacattgtgcaagaaatatcaatcaacatgcatta
ttacatgctgatgaaactcaacatcctttgactctaagttttagtgatttatcagtttgg
tgttacggatgtgaagcttatattgacaatccgagattatatgcagctcggaatgcagca
catcaaagtaaatttaatcaagattcaccatggacttatgagggacaatga
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