Vespa crabro (European hornet): 124426057
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Entry
124426057 CDS
T09462
Name
(RefSeq) exosome complex exonuclease RRP42-like
KO
K12589
exosome complex component RRP42
Organism
vcrb
Vespa crabro (European hornet)
Pathway
vcrb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124426057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcrb03019
]
124426057
Messenger RNA biogenesis [BR:
vcrb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124426057
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
124426057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
124426057
NCBI-ProteinID:
XP_046823266
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All DBs
Position
8:complement(4268267..4270549)
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AA seq
291 aa
AA seq
DB search
MAEVPLSLGEKTFILHGVDANFRNDGRKRYEYRSFEIETNLMQQTHGSSRLRIGNTDILV
GVKVEIDSPYIDRPCEGKLEFFVDCSANATPEFEGKGGDDLAMEISNILSLSYQTPGAFN
LKDLCILPYKKCWKMFVDILILQCGGNLFDAVGIAVKAALYSTEIPRVTAASLDGGEADI
QISDDPFDCIKLDITNYPVIVTLCKIGENCVIDPTSEEEMCSPASTIISIMPNGNITSIV
KIGYGSMQDTILLKMLEMGKTIALALNDALMNALKKETELGPTKPIVGFLR
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagttccattgagcttaggagaaaaaacatttattcttcatggagttgatgca
aattttagaaatgatggaagaaaaagatatgaatatcgatcattcgaaattgaaaccaat
ttgatgcaacaaacgcatggttcatcaagattacgaataggaaatactgacattttagtt
ggtgttaaagtagaaattgattcaccatatattgatcgaccatgtgaaggaaaattagaa
ttttttgtagattgttcagccaatgctaccccagaatttgaaggtaaaggtggagatgat
ctagcaatggaaataagtaacattttatcattatcttatcagactccaggtgcatttaac
ttaaaagatttatgtattttaccatataaaaaatgttggaaaatgtttgttgatattttg
atattacaatgtggagggaatctttttgatgctgtaggtatagctgtaaaagctgcttta
tatagtacagaaataccaagagtaactgctgcatctcttgatggtggagaagcagatata
caaatatcagatgatccttttgattgtatcaaattagatattacaaattatccagttatt
gtcactttgtgtaaaataggagaaaattgtgtaatagatcctacttcagaagaagaaatg
tgtagtccagcaagtacaattatatctataatgccaaatggtaatataacatcaattgtc
aaaataggatatggtagtatgcaagatactatattacttaaaatgctagagatgggtaaa
actattgcacttgcattaaatgatgctcttatgaatgcattaaagaaggaaacagaactt
ggaccaacgaaacctatagttggatttctcagataa
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