Vespa crabro (European hornet): 124426310
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Entry
124426310 CDS
T09462
Name
(RefSeq) protein CASC3-like isoform X1
KO
K14323
protein CASC3
Organism
vcrb
Vespa crabro (European hornet)
Pathway
vcrb03013
Nucleocytoplasmic transport
vcrb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124426310
03015 mRNA surveillance pathway
124426310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcrb03019
]
124426310
Messenger RNA biogenesis [BR:
vcrb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124426310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
124426310
NCBI-ProteinID:
XP_046823793
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All DBs
Position
8:6161757..6168146
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AA seq
833 aa
AA seq
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MSDTRRRRKSNQSCGSDDLSDSYEELNATKETQSSEQTDGHQDSECDVYVTDSDVESQEG
VLRESGDGQEEEKPQKKLDDDEDRRNPQYIPKRGTFYEHDDRTTDEVIDNNADTTNERET
KEKKVWKDKEDRWDHDRYNDEEQAPKSHEELIAVYGYDIRNEEGPPRARRRRRYGRGPNK
YTRNWEDEDAYGKTGNNTSSKSNNRKFNRSGEDFPALGTNKNSSTTVEEPVISSAWYNSK
SKTINKTQNFPPLQSQHDGQKTKSSGTSVGHTNENKVPNESNNTVWKKEGKHGNHNQNTN
GNSGSSGDAEKSVETKTLPRESNKRNVQESTNFGTGRTRGRGFKANANNNVLSNRTIETK
PKGRGAGPINSENRRSNAIQHDDDNQIIHDMKNIHINDGGQYHQSGKHNKNYYAQSPGQQ
RANTVPPRMQQQQSHQTQSQQGHQQQQTVQHQQQQDSSGNRPKRYSSLRQRPTVSENPTQ
QNYQPPHGQHGQHTQHPQHAQHAQHAQHGQHGQHGQHGPHGQHSQHGQHGYYTPQAGNPR
GVLDSQGYPQGHFEQTAPVAAPAAPMAGQPVIPLPPNGQPASYAPPPFLVPPPQFIPPQT
APPSIINYVPGPNGPAFQPNFQGYQSYTSPVQAQGPPPQELFQPQGCTYYSPVQQQQQQQ
QTAPVRRPKAAIPILPPPDNQQHQSSRGRGRSTQSNQQTNQPGSVQQSEQEVKSNSVESD
QKTVPGQFDNLQNDQSESIQQKEENLSIISNNIGNEESVTKNIDDVNTSVEISVVTTDKI
EDINNKETLKTVEDSKSVITSKFIQLDIDKTDSEPPKLETTVPETSVVEEAVA
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatacgcgacgtcgtcgaaaatccaatcaatcgtgtggttctgatgatctctcg
gattcttacgaggagttgaacgccacaaaagagactcaaagtagcgaacaaactgatggt
catcaagattcggaatgtgatgtttatgtaactgattctgatgttgagtcacaagaaggt
gtattgcgagaaagtggagatggacaagaagaagagaaaccccaaaagaaattggacgat
gatgaagatagacgaaatccacaatatatacctaaacgtggaacattttatgaacatgat
gatagaactacggatgaagttatagataataatgcagatactacaaatgaaagagaaact
aaagaaaagaaagtatggaaagataaggaggatagatgggatcatgataggtataatgat
gaagaacaagctccaaagagtcatgaagaattgatagcagtgtatggttatgatattaga
aatgaagaaggtccacctagagctagaaggagaagaagatatggacgtggtccaaataaa
tatacacgtaactgggaagatgaagatgcttatggtaaaactggtaataatacatcatct
aaaagcaataatagaaagtttaatagaagtggagaagattttcctgcgcttggtactaat
aagaattcctccacaactgtagaagaaccagtaatatcatcagcatggtataatagtaaa
agtaaaactataaataaaacacaaaactttccacctttacaatcacagcacgacgggcaa
aagacaaaatcttccggaacatctgttggtcatacaaatgaaaacaaagttccaaatgag
tccaataatacagtttggaagaaagaaggaaaacatggaaatcataatcagaatacaaat
ggaaatagtggatctagtggagacgcagagaaatctgttgaaacaaaaactttaccaaga
gaaagtaacaaacggaatgtacaagagtcaacaaatttcggaacaggcagaactcgtgga
agaggatttaaggcaaatgctaataacaatgtattgagcaatagaacaattgaaaccaaa
ccaaaaggaagaggagctggtccaataaattctgaaaatagacgaagtaatgcaatacag
catgacgatgataatcaaattatacatgatatgaaaaatattcacatcaatgatggtgga
caatatcatcagagtggtaaacataataaaaattactatgcacaatccccgggtcaacaa
agagcaaacactgttccaccaagaatgcagcaacaacaatctcatcaaacacagtcacag
caaggacatcagcagcaacaaacagttcagcatcaacaacagcaggatagttctggtaac
agaccaaagcggtattccagccttcgtcaacgtccaacagtttctgagaatcctacacaa
cagaattatcagcccccacatggacaacatggacaacatacacaacatccgcaacatgca
caacatgcacagcacgcacagcatggacaacatggacagcatggacaacatggaccacat
ggtcaacacagtcaacatggtcaacatggatattatactcctcaagctggaaatccaaga
ggcgttctagactcccaaggttatccacaaggacatttcgaacaaactgcacccgttgct
gctccagctgctcctatggctggacaaccagtaatacctttgccaccaaatggtcaacct
gctagctatgctccacctccatttttggtgccaccacctcagtttataccacctcaaact
gctcctcctagcataattaattatgttcctggacccaatggaccagcatttcaaccaaat
tttcaaggctatcaaagttacacttctcctgtacaggcacaagggccacctccacaagaa
ttattccaaccacaaggttgtacttattatagtcctgtgcaacagcaacagcaacaacaa
caaacagctcctgtaagacgaccaaaggcagccattccaattcttccacccccagataat
cagcaacatcaaagtagtcgtggcagaggtagaagtactcaatctaatcaacaaactaac
caacctggtagtgtacaacaaagtgaacaagaagttaaaagtaactcagtggaaagtgat
caaaagactgtgccaggacagtttgacaatctacaaaatgatcaatcagaatcgattcaa
caaaaggaagaaaacttaagtataatatcgaataatataggaaacgaagaaagtgtaact
aaaaatattgatgacgtaaatacgtcagtagagatttcagtcgttacaacggataaaata
gaagatataaataacaaagaaacactgaaaacagttgaagatagtaaaagtgtgattact
tcaaagtttatacaattggacattgataagactgatagtgaaccacctaagctcgaaact
actgttcctgaaacttctgttgttgaggaagcggttgcctaa
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