Vespa crabro (European hornet): 124426339
Help
Entry
124426339 CDS
T09462
Name
(RefSeq) Bloom syndrome protein homolog isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
vcrb
Vespa crabro (European hornet)
Pathway
vcrb03440
Homologous recombination
vcrb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124426339
03460 Fanconi anemia pathway
124426339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcrb03032
]
124426339
03400 DNA repair and recombination proteins [BR:
vcrb03400
]
124426339
Enzymes [BR:
vcrb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
124426339
DNA replication proteins [BR:
vcrb03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
124426339
DNA repair and recombination proteins [BR:
vcrb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
124426339
Bloom's syndrome complex (BTR)
124426339
FA (Fanconi anemia) pathway
124426339
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RQC
RecQ_Zn_bind
Helicase_C
HRDC
Motif
Other DBs
NCBI-GeneID:
124426339
NCBI-ProteinID:
XP_046823878
LinkDB
All DBs
Position
1:complement(20466333..20472730)
Genome browser
AA seq
1395 aa
AA seq
DB search
MSKKLPISQSTGVPKLTTFFKRLQNQDNLTSSTPIEQNITKSSNVKYDISIDSDDDSDSF
ISSNIKKELKVIDNINLESSNDLPNQSTFKAQSQESNSSVVQYVEDSVEEKERLENIQKS
TTSDIKDSCKKKIFFEQLSESEDECTKLKICLRLNNGLKQTEDKKESPEIQENPISNTDM
SLLAVYNKTATMSPEINKHNSFDSYNNPEEIKHNTNENLIMENVVNQDIKDHNKRNIKKA
KNIIISDSDNDNSDSKETVQMTPRKKWIGPDYKLNLKPLGIDKQLISWIQSIKEKPIMSS
LPGTENELEDRRQGLQDLQIEILEKFFVAMSEIPLPILEKFPKFNADAFHKLKIFNQHVK
AKLRLVNKKLENMQKMEKELKSTIDNQFLNEPECHSPVFKQHNIVKSSPINLHNSKDSSM
NLSLNSSSKEIVGPNETLDGLSSSITRTSLSPCQTDDTEKVNVKTSVNTNSPVVSTNTTT
ATMRKSTFQLKRPVRATICTEVTKKIGELWEKEQQQSRLLKTKSDSECDNVSFKPEQNEL
VYQNKKVDYDYSKTKEFQQDAQPTFNQMDDWINNGKDFEDDIMENKNKSITETFKKEYKP
SVSLNDSSNLDLSLSMKATSSPEKKKSTTTNNKININLNTSVSEGIFTGNYKNDGISGEF
DGLNYPHSREMLKIFRQKFGLYSFRPNQLQAINAALLGFDCFVLMPTGGGKSLCYQMPAL
LVPGVTIVISPLKSLILDQVQKLTSLDIPAAHMSGNITENQSAGIYRELSKKEPGLKLLY
VTPEKISASQKLSSILTTLFQRNLLARFVIDEAHCVSQWGHDFRPDYKKLKCLRENYPTV
STIALTATATPRVRTDILYQLGMTKPKWFMSSFNRPNLRYSIIAKKGKNCSDEVIAMIKT
KFKNQCGIVYCLSRKDCDDYALQMRKNNIQAQSYHAGLTDNQRSDIQGRWISEEMRIVCA
TIAFGMGIDKPNVRFVIHAALPKSIEGYYQESGRAGRDGENAECILFYNYADMHRIRKMI
EIDNSNPDVIKTHMDNLFKMVSFCENKTDCRRALQLNYFGEIFNREKCIENKSSACDNCR
CKAEFTMLDATNHARQIMKAVREINQRKNSKLTLVFLTDIFKGSDLKKIRESGLTNHPLY
GQGKSWNRGDIERLLHEMVLKEYLREEMYINNEIACAYLKLGHKAAELMTKKDTKVIIPI
RAANSSSNAVATVSTVTTKVNKVLQELQERCYSELIGIIRGIAGALDVSASSIMNMIAIR
AMSQQLPDSEEAMLKIPHVTKANFDKYGKALLDITQKYAAEKYVLLSEADENSADSTDED
TSSWNTATNSSYSGSTRGRYGNTQGRKRKGYNNYRSSTKKARYTNSSTQKGKAASKRKTN
AAKPTLGLVSFSKKK
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaagcttcctataagtcaaagtacaggagttccaaagttgacaacatttttt
aaacgattgcaaaatcaggataatctaacctctagtacacctattgaacaaaatattaca
aaaagttcaaatgtgaaatatgatatttcaattgattctgacgatgacagcgatagtttt
atttcttcaaatataaaaaaagagcttaaagtgatagacaatataaatcttgaaagctca
aatgatttaccaaatcaaagtacatttaaagcacaatctcaagaaagtaattcttcagtt
gtacagtatgtggaagattctgtagaagaaaaagaaaggttggaaaatattcaaaaatct
actacttctgatataaaagattcatgtaagaaaaaaattttctttgaacaattatcagaa
agtgaggacgaatgtacaaaattaaaaatatgtttacgtttaaataatgggttaaaacaa
acagaagataaaaaagaaagcccagaaatacaagaaaatcccattagtaatacagatatg
tcactattagctgtgtataataagactgctacaatgtcacctgaaataaataaacataat
tcatttgatagctataataatcctgaggaaataaaacataatacaaatgaaaatttaata
atggaaaacgttgtaaaccaagacattaaagaccataacaaaagaaatattaaaaaagct
aaaaatattatcatatctgattctgataatgataattctgattcaaaagaaactgttcag
atgacaccaagaaagaaatggataggtcctgactataaattgaatttgaagcctttaggt
atagataaacaattaatttcttggattcaatcaataaaagaaaagccaattatgtcatct
ttgcccggaacagaaaatgaattggaagatagacgtcaaggtctacaagatctacaaata
gaaattctggaaaaattttttgtggctatgagtgaaattccattgcctatattagaaaaa
tttcctaaatttaatgcagacgcatttcataaattaaaaatatttaatcagcatgttaaa
gcaaaattacgtttggtaaataaaaagctagaaaatatgcaaaaaatggagaaagaatta
aaatctacaattgataatcaattcttaaatgaaccagaatgtcatagtcctgtttttaag
caacataacatagtcaaaagtagtccaataaacttgcacaattcaaaggatagtagtatg
aatcttagtcttaattcttctagcaaagaaatagtaggtcctaatgaaactttagatgga
ttatcatcaagcattactagaacttctctaagtccatgccaaacagatgatactgaaaaa
gtaaatgtgaaaacttctgtcaatactaattcacctgtagttagtacaaatactactaca
gctacaatgagaaaaagtacttttcaattaaaaagacctgtcagagctacaatatgtaca
gaagttacaaaaaaaataggcgaattatgggagaaagaacaacaacaatcaagactatta
aaaacaaaatctgattctgaatgtgataatgttagctttaagccagagcaaaatgaactt
gtatatcaaaataaaaaggttgattatgattattctaaaacaaaagaatttcaacaagat
gcacaacctacgtttaatcaaatggatgattggattaataatggtaaagattttgaggat
gatataatggaaaataagaacaaaagtattactgaaacatttaaaaaagagtataagcct
tctgtatctttaaatgatagttctaatttagatttaagtttaagtatgaaagcaacgagt
agcccagaaaaaaagaagagtactactacaaataataaaataaatataaatttaaataca
tccgtttctgaaggaatctttacaggaaattataaaaatgatggtattagcggagaattc
gatggtttaaattatcctcattctcgtgaaatgttaaaaatcttcaggcagaagtttggt
ttatactctttcaggccgaatcaattgcaagcgattaatgcagcgctccttggatttgac
tgttttgttttgatgcctacaggtggaggaaaatcactttgttatcaaatgccagctctt
cttgtaccaggagttacaattgttatatctcctttaaaaagtcttattcttgatcaagta
cagaaattgacttcacttgatattcctgcagcacacatgtctggcaatataactgaaaat
caatcagctggaatatatagagaattatcaaagaaagaaccgggcttaaaattattatat
gtaacacctgaaaaaatatctgcttcccaaaaattaagcagtattttaacaactttattt
caaagaaatttattagcacgatttgttatcgatgaagcacattgtgtaagtcaatgggga
catgattttagaccagattataaaaaattaaaatgtcttagagaaaattatcctacagta
tcaacaattgctttaacagctacagctactccaagagttagaacagatatattgtatcaa
ttgggtatgacaaaaccaaaatggtttatgtcaagtttcaacagaccgaatttgcgatat
agtataattgcaaagaagggcaaaaattgttctgatgaagttatagctatgataaagaca
aaattcaaaaatcaatgcggcattgtttattgtttatcgcgtaaagattgtgacgattac
gctttacaaatgagaaaaaataatattcaagctcaaagttatcatgctggattgacagat
aatcagaggagtgatattcaaggacgttggatttcagaagaaatgaggattgtctgtgca
actatagcatttggtatgggtatcgataagcctaatgtacgctttgtaatacatgctgct
ctaccaaagtcaatagaaggttattatcaagaaagtggacgtgctggtcgtgacggagaa
aatgctgaatgtatattattttataattatgctgatatgcatagaatcagaaaaatgatt
gaaattgataattcgaatccagacgttataaaaacacatatggataatttatttaagatg
gtatccttttgtgaaaataaaaccgattgtcgtagagcattacaacttaattatttcggt
gaaatttttaatcgggagaaatgtattgaaaataaatcatctgcatgcgataattgtagg
tgtaaggcggagtttactatgttggatgcaacaaatcatgcacggcaaattatgaaagcg
gtacgagaaattaatcagagaaagaattctaaattaactttagtatttcttacggatatt
tttaagggaagcgatttaaaaaaaattagagaatcaggtcttacaaatcatccattgtat
ggtcaaggtaaatcgtggaacagaggtgatatagaacgtcttttacatgaaatggtactt
aaagaatatttaagagaggaaatgtatataaacaatgaaatcgcgtgcgcatatttaaaa
cttggtcacaaagcggcagaattaatgaccaaaaaagacacaaaggtgattattccaata
cgtgctgcaaatagtagttcaaatgccgtagcaactgtttctacagttacaactaaagtt
aacaaagttctacaagaattgcaagaacgttgttattcagaattaataggaattattaga
ggaatagcgggtgcactcgatgtatctgcatcgtcaatcatgaatatgatagctataaga
gcaatgagtcaacagttacctgatagtgaagaagccatgttaaaaattccccatgtcaca
aaggcgaattttgacaaatatggcaaagctttattagatattacacaaaaatatgcagca
gaaaaatatgttttattgagtgaagctgatgagaattcggctgacagtactgatgaagat
acaagttcatggaacactgctacaaattcctcttattctggaagtacaagaggtagatat
ggaaatacacaaggaagaaaacgtaaaggttataataattatcgttcaagcactaaaaaa
gctagatatacaaattcaagcacacaaaaaggaaaagcagcttcgaaacgtaaaactaat
gcagcaaagcctactctaggacttgtaagtttttcaaagaagaaataa
DBGET
integrated database retrieval system
