Vespa crabro (European hornet): 124426523
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Entry
124426523 CDS
T09462
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
vcrb
Vespa crabro (European hornet)
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcrb03009
]
124426523
Enzymes [BR:
vcrb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124426523
Ribosome biogenesis [BR:
vcrb03009
]
Eukaryotic type
Pre-60S particles
Helicases
124426523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
Gp7_5th
Motif
Other DBs
NCBI-GeneID:
124426523
NCBI-ProteinID:
XP_046824240
EnsemblRapid:
ENSVCRG00010015669
LinkDB
All DBs
Position
9:complement(3182477..3185026)
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AA seq
590 aa
AA seq
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MKTQNWKELDIPLSKPVLETLQELKFEIMTPVQAACIPLLLKGKDVAAEAVTGSGKTLAF
LIPLMEILQRRPDKWKSTEIGALIITPTRELAIQISEVLTKFLNKLLLLKQVILVGGTTI
NEDIEKLKAGANIIIATPGRLEDMLSNCKSINLTKCLKSLEILILDEADRLLDLGFSKTL
DIILSYLPRLRRTGLFSATQTKELQQLIRAGLRNPAFVSVKEKANISTPLSLTNNYVIIQ
AENKLSTMISFIQQKGIHLKYMIFLSTCACVDYFSHVIQAMLSETRVLALHGKMKKKRYK
IFDEFRSIEAGILICTDVMARGIDISEVDWVLQYDPPSTASNFVHRCGRTARIGHEGSAL
LFLLKNEDAYVDFIKRNQKVDIQEMKLEVCTDIVRKCLQCMRDLQLKDRQIFDKANRAFV
SYVQAYNKHECNLILRLKDIDLGNLAMGFGLLKMPRMPELKGRDITSFVASEIDFNSITY
LNKEKERIRLEKLNQFHNTGTWPGKIKRKCKQTESWTETKKRKLEKQEKRKKRKEKKKIQ
QDKGVVPVKKKKRSITSEELEELAKDVALIKKFKKKKITKEEFETQFGIS
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgcaaaattggaaagaattagatattcctttaagtaagcctgtattagaaaca
cttcaagaattgaaatttgaaattatgacacctgttcaagcagcctgtatacctctcctt
ttaaaagggaaagacgttgccgcagaggcagtaacaggtagtggcaaaacacttgctttt
cttattcctttaatggaaatattacaaagacgccctgataaatggaaaagtacagaaata
ggagctttaataataacaccgactagagaattagctattcaaattagtgaagtattaaca
aaattcttaaataaacttttattattaaaacaagtaattcttgtcggtggtacaactatt
aacgaagatatagagaaattaaaggctggtgccaatattataatagcaactcctggtaga
ctagaagatatgctttctaattgcaaaagtataaatttaacaaaatgcttgaaatctttg
gaaatattaatcttggatgaagctgatagattattagacttaggtttctcaaaaacatta
gatattatattaagctatttaccgcgtttacgaagaacaggtctattttctgctacgcaa
acaaaagaattacagcaattaatcagagcgggattaagaaatccggcttttgtttccgta
aaggagaaagctaatatatcaacacctttgagtttaacaaataattatgtaataatacaa
gctgaaaataagttatcaacaatgataagttttattcaacaaaaaggaattcatttaaaa
tatatgatttttttatctacctgtgcgtgtgtagattacttcagtcatgttatacaagca
atgttatcagagacacgagtattagctttacacggcaaaatgaagaaaaaaagatataaa
atatttgatgagtttcgttcaatagaagctggcattttgatatgtactgatgttatggct
agaggtattgatatatcagaagtagattgggtattacaatatgatcctccatctactgcg
agcaactttgtacatagatgtggaaggacagcccgaattgggcacgaaggaagtgcatta
cttttcctattaaaaaatgaagatgcatacgtagattttattaaaagaaatcagaaagta
gatatacaagaaatgaaattagaagtatgtacggatatagtgagaaagtgtttacaatgt
atgcgtgatttacaattaaaagatagacaaatatttgataaagcaaatagagcatttgta
tcatatgtacaagcatataataaacacgaatgtaatttaattttaagattaaaagatatt
gacttaggaaatcttgccatgggttttggcttattaaaaatgccacgaatgcctgaattg
aaaggacgtgatataacatcttttgttgcttcagaaattgatttcaattcaattacatat
ttgaacaaggaaaaggaacgaatcagattagaaaaattaaatcagtttcataatacaggt
acatggccgggaaaaataaaacgtaaatgtaaacaaacagaatcttggactgaaacaaaa
aagagaaaattagaaaaacaagaaaaacgtaaaaagcgaaaagaaaagaaaaaaattcaa
caggacaagggtgttgttccagttaaaaaaaagaagagatctattacttctgaggagtta
gaagaattagcaaaagatgtagcattaataaaaaaatttaaaaagaagaagataactaag
gaagagtttgagacacaatttggaattagttaa
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