Vespa crabro (European hornet): 124426565
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Entry
124426565 CDS
T09462
Name
(RefSeq) myb-like protein I isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
vcrb
Vespa crabro (European hornet)
Pathway
vcrb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124426565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcrb03000
]
124426565
03019 Messenger RNA biogenesis [BR:
vcrb03019
]
124426565
04121 Ubiquitin system [BR:
vcrb04121
]
124426565
Enzymes [BR:
vcrb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124426565
Transcription factors [BR:
vcrb03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
124426565
Messenger RNA biogenesis [BR:
vcrb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124426565
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124426565
Ubiquitin system [BR:
vcrb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124426565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_2
Nup35_RRM_2
zf-UDP
zf-CCCH_2
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
124426565
NCBI-ProteinID:
XP_046824341
LinkDB
All DBs
Position
9:3338470..3348211
Genome browser
AA seq
1050 aa
AA seq
DB search
MSVLNQSGEDAVECPLCMELLEVDDLNFFPCTCGYQICRFCWHRIRTDENGLCPACRKAY
SENPANFKPLTKEEIARLKAEKRLKDQQRKQRVTENRKHLANVRVVQKNLVFVVGLPMRL
ADADVLKRHEYFGKFGKIHKVVINQSTSYAGSQGPSASAYVTYQRQEDALRAIEAVNNIV
VDGRTIKTSLGTTKYCSHFMRNQACPKPDCMYLHDLGDQEASFTKEEMHQGKHQEYERKL
VQSLHAHASALQRKPTPSPPVTSSIGRENGTTNSQAKEAWPSLQPGQTNNTQTNCKESSP
PTQTTSQQHSIINGSSLTTQQTHISSGGPMHQQNNNNKGENGMGLRRGKSNSESKAQAAR
NKHKNCQNKEKHSTRTTSRSESSSISVQNNVQPQVNGQKDIRNFSAETNSDVLQKLGNKC
KVDQQQQQQQQQQQSNKISKPAQQPSNELKINGVIQNGERRHSDSETDQQREGSTPASTI
SSSEDSNVNHQVEQLVESSEENNGAAILGSSPASTNSSQGANQQPPPGLHNGSQMQLNHR
SIFQADNNSFFSTNTFQKISTAASVTSNSLAGNTNLDWPSTGLASIPDSLPTVHSSEDWQ
AAFGFHPESTRSNHIVRKISPSNSPRVTFNSEDFAEEEVYSNSQYNAISESSGTFATNLL
VNSPASKFMADFQQNSLQQRLAMQAQQNQENCEYIKQNGHATLKEVQNHHESGSDVKADD
DLGFDPFHETQKALAELMENEMQLQQQRLFQQQQQQQQQREREEQSRVQHQQSLANLGQQ
HFPQVAHIAHLQQQAQHLQNLQVLQQSHSLLSRLPQNLLQSGTQSPAQNSVTAASLAQRS
RLPPPGFPGATPNHMNSFGLGIPRPAPTNNALTGTQPSQQSAYLPNGNPLLNTQVGIGKC
AGDTVYTLKDWCEISSQQQQQQFHHQALHQKGGWNNFGPIADWTSIDPAIVSSSRPLPFQ
TTSTWQFPHVHPSHTVSHNAQQEQNAPAQHWAMQPPPGFAAPATTGQLSNQQASTAAQPH
TKLISAGSEIENYKHTKSTNDVVKYSYLMK
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtattgaatcaaagtggagaggatgcagtggagtgtccattgtgcatggaacta
ttggaggttgatgatttaaatttttttccgtgcacatgtggctaccaaatatgcagattt
tgttggcatagaatacgtacggacgaaaatggcttatgccctgcgtgcaggaaggcctat
tctgaaaaccccgctaattttaagcctcttacgaaggaagaaattgcaagattaaaagca
gaaaagagattgaaggatcaacagcgtaaacaaagagttacagaaaatcgtaaacatcta
gcgaatgtaagggtagttcaaaaaaatttagtatttgtagtaggattaccaatgcgattg
gcagatgcggatgtattaaagagacatgagtattttggaaagtttggtaagattcataaa
gttgtgatcaatcagagcacttcttatgcagggtctcagggccctagtgcctcggcatat
gtcacctatcaacgccaggaagatgctctgcgtgctatagaggctgtgaataatattgtt
gtggacggacggacaataaaaacgtcactgggtacaacaaaatactgttcacattttatg
cggaatcaggcgtgtccaaaaccagactgcatgtatttacacgatctcggggaccaggaa
gcatcgtttacgaaagaggaaatgcatcaagggaaacatcaggaatatgagcgcaaactt
gtgcaatctttacatgctcatgcatctgcattacagcgaaaaccaacaccatcaccacct
gttacaagtagtattggtcgagaaaatggaactacgaattcacaagccaaggaagcatgg
ccttcgttacaaccaggacaaacgaataatacacaaacgaattgtaaagaatcatcacca
cctacccaaacaacttcacagcagcatagcataattaatggtagcagtcttaccactcag
caaacgcatatatcatctggaggtcctatgcatcaacagaataacaataataaaggggaa
aatggtatgggtctacgcagaggcaaaagtaatagtgaaagtaaggcacaagcagcgcga
aataaacataaaaattgtcaaaacaaagagaaacatagcactcgaacaacgtcacgttct
gaatcaagctcaattagtgtacaaaataatgtgcaaccacaagtgaatggtcagaaggat
ataagaaatttttcagctgaaacgaatagtgatgtattgcagaagttaggcaataagtgt
aaggttgatcaacagcagcagcagcagcaacagcagcaacagtctaacaaaatttctaaa
ccggcgcaacaaccatctaatgaacttaaaataaatggtgtaattcaaaatggggaacga
cgacattcggatagtgaaacagatcaacaacgagaaggtagtacaccagctagtacaatt
tcaagttcagaagattctaatgtaaatcatcaagtggaacaattagtggaatcaagtgag
gagaacaatggtgctgcaattttaggttcatcacctgctagcacaaactcatcgcaaggt
gccaatcaacagccaccaccagggctgcataatgggtctcaaatgcaacttaatcaccgg
tcaatctttcaggcggacaataatagtttcttcagtacaaataccttccagaaaatatct
acagccgcctcagtcacatccaattccttggcaggaaatacaaatttggattggccgagt
acaggcttggcttccattcctgattctttaccaacagttcactcaagtgaagattggcaa
gcagcatttggttttcatcctgaatctacgcgatcaaatcacattgtacgaaagattagt
ccttccaattcaccacgagtaactttcaactctgaagactttgcagaagaggaagtgtat
agtaattcgcagtataatgcaatctcagaatcctcaggcacctttgcaactaatttactt
gttaattcacctgcatctaaatttatggcagacttccagcaaaattcattacaacaaagg
cttgctatgcaagcacaacaaaatcaagaaaattgtgaatatatcaaacaaaacggacat
gcaactttaaaagaagttcaaaatcatcatgaatctggatctgatgtaaaagcagacgac
gatttaggctttgatccttttcatgaaacgcaaaaagcacttgcagagttaatggagaat
gaaatgcagttacaacaacaaagattatttcaacaacaacagcagcaacaacaacagaga
gaacgagaagagcaaagcagggtacaacatcaacaaagtcttgctaatcttggtcagcag
cactttccacaggttgcacatatagcacatctacagcaacaagcgcagcacttgcaaaat
ttgcaagttcttcaacaatcgcattccctcctgtctcgtcttccgcagaatcttctacaa
agtggcacacagagtcctgctcagaattctgtaacagctgctagtctggcacagcgcagt
cgtctccctccgccaggtttccctggcgcaaccccaaatcacatgaactctttcggtctt
ggtataccgcggcctgcccctacaaacaatgccctcacgggaacacagccatcacagcaa
agtgcgtatcttccaaatggaaatcctctactcaatacacaagtaggtatcggtaaatgc
gcaggcgatactgtttacacattaaaagattggtgtgagataagtagccaacaacaacaa
caacaatttcatcatcaagcattacatcaaaaagggggatggaacaactttgggcctatt
gcagactggacttcaattgatccagctattgttagttcatctaggcctcttccattccaa
actactagcacgtggcaatttccacatgtacatccttctcacacagtatctcacaatgcg
caacaggaacagaacgcaccagctcagcattgggcaatgcaaccaccgccaggctttgct
gcgcctgcaactacagggcaactaagtaatcaacaagcaagcacagctgcacagccgcac
accaaacttatctctgcaggatcagaaattgagaattacaaacacaccaagtctacaaat
gacgtggtgaaatattcgtatctgatgaaatga
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