KEGG   Vespa crabro (European hornet): 124427850
Entry
124427850         CDS       T09462                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
vcrb  Vespa crabro (European hornet)
Pathway
vcrb03030  DNA replication
vcrb03410  Base excision repair
vcrb03420  Nucleotide excision repair
vcrb03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vcrb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    124427850
   03410 Base excision repair
    124427850
   03420 Nucleotide excision repair
    124427850
   03430 Mismatch repair
    124427850
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vcrb03032]
    124427850
   03036 Chromosome and associated proteins [BR:vcrb03036]
    124427850
   03400 DNA repair and recombination proteins [BR:vcrb03400]
    124427850
DNA replication proteins [BR:vcrb03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    124427850
  DNA Replication Termination Factors
   ELG1-RFC complex
    124427850
Chromosome and associated proteins [BR:vcrb03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    124427850
DNA repair and recombination proteins [BR:vcrb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     124427850
  Check point factors
   HRAD17(Rad24)-RFC complex
    124427850
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 RCF1-5-like_lid AAA_14 AAA_16 AAA_lid_RFC1 nSTAND_NTPase5 Rad17 Viral_helicase1 nSTAND3 AAA_11 Mg_chelatase RuvB_N AAA_18 AAA_19 AAA_24 AAA_assoc_2 DNAX_ATPase_lid NTPase_1 MeaB RNA_helicase AAA_23 AAA_28 ABC_tran AAA_5 MipZ AAA_3 ATPase_2 IstB_IS21 AAA_25 CbiA AAA_30
Other DBs
NCBI-GeneID: 124427850
NCBI-ProteinID: XP_046827177
LinkDB
Position
11:complement(1943225..1945145)
AA seq 351 aa
MTQDNDTDDIMEIEILPSTSGYNTKNKDQSNKSCDLPWIEKYRPQVFTDIVGNEDTIARL
SVFAQHGNTPNIIISGPPGVGKTTTILCLARSLLGPTFKDAVLELNASNDRGIDVVRNKI
KMFAQKKVNLAKGKHKIIILDEADSMTDGAQQALRRTMEIYSSTTRFALACNNSEKIIEP
IQSRCAMLRYGKLSDAQILAKVIEVCQKENVSYTDDGLESIVFTAQGDMRQALNNLQSTH
NGFGHVNGTNVFKVCDEPHPLLVKEMLELCTQGNICKAFTIMQHLWKLGYSAEDMIGNIF
RVCKNLPIDEKLKLDMIKEIGITHLGIVNGINSLLQLNSLLARLCQKAVSK
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgacgcaggacaatgataccgatgatataatggaaatagaaattttaccatctacgagt
ggatataatacaaaaaataaagatcaatctaacaaatcttgtgatttaccttggattgaa
aagtatcggccacaagtatttacagatatcgttggcaatgaagatactattgctcgatta
tctgtttttgctcaacatggaaatacaccaaatattattattagtggaccacctggcgtt
ggaaagactacaacgattttatgtttggcacgttcacttttaggtccaacatttaaagat
gcagtattagaattaaatgcatctaatgacagaggaattgatgtcgttagaaataagatc
aaaatgtttgctcagaagaaagtcaatttagctaaaggaaaacataagataattattttg
gatgaggctgatagtatgactgatggagcacaacaagcacttcgtcgtacaatggaaata
tacagtagtacaactagatttgcattggcatgtaataatagtgagaaaattattgaaccg
atacaatcacgttgtgccatgttaagatatgggaaattaagtgatgcacaaatcttggca
aaagttatagaagtttgtcagaaggagaatgtttcatatacggacgatggtttagaatct
attgtatttaccgcccaaggtgatatgagacaagcattaaataatttacaatctactcac
aatggatttggtcatgtaaatggtacaaatgtttttaaagtatgcgatgaaccacatcca
cttttggtaaaggaaatgcttgaattatgtacccaaggaaatatttgtaaagcttttacg
ataatgcaacacttatggaaattgggttattccgcagaagatatgattggaaatatattt
cgtgtttgtaaaaatcttcctatagatgaaaaattaaaattagatatgataaaggaaata
ggaataacgcatttaggtattgtgaatggtattaatagtttgttacaattgaacagtctg
ctggcccgattatgtcaaaaagctgtttcgaaataa

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