Vespa crabro (European hornet): 124428389
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Entry
124428389 CDS
T09462
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
vcrb
Vespa crabro (European hornet)
Pathway
vcrb03030
DNA replication
vcrb03410
Base excision repair
vcrb03420
Nucleotide excision repair
vcrb03430
Mismatch repair
vcrb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124428389
03410 Base excision repair
124428389
03420 Nucleotide excision repair
124428389
03430 Mismatch repair
124428389
03440 Homologous recombination
124428389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcrb03032
]
124428389
03400 DNA repair and recombination proteins [BR:
vcrb03400
]
124428389
Enzymes [BR:
vcrb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
124428389
DNA replication proteins [BR:
vcrb03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
124428389
DNA repair and recombination proteins [BR:
vcrb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
124428389
MMR (mismatch excision repair)
DNA polymerase delta complex
124428389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
divDNApol
DNA_pol_B_exo2
DUF6356
Motif
Other DBs
NCBI-GeneID:
124428389
NCBI-ProteinID:
XP_046828295
EnsemblRapid:
ENSVCRG00010000262
LinkDB
All DBs
Position
12:6042437..6047535
Genome browser
AA seq
1105 aa
AA seq
DB search
MIRRQYSGPGAAKKAKFSQNDDEDDYPGSFEAELATMDDMDDQCNDLTQIIGEPIDNCEM
TNEKPKAGPEQENISAKWSRPSPPDLNPQIDTLTFQQIDIDHYIGQPLPGMPGSKFGPVA
IMRMFGVTEQGNSICCHVHGFCPYLFVTAPQNFTNAHCKPFKDALDQAVKKDMKSNQNTV
QEAILAVEIVYKQTVYTYTGNDKNAFLKITVALPKLIAPCKRLLEKEIVYNEFNHTYTPF
ETNIDFDIRFMVDTSVVGCCWIELPPNTWKLRGQYGHTLPVISRCQLEVDIAWDAFIAHP
AEGEWSKVAPFRILSFDIECAGRKGIFPEPNHDPVIQIANMVIRQGETEPFLRNIFTLNT
CAPIVGCQVLSFNKEQELLQKWAEFIRQLDPDIFTGYNINNFDFPYLINRAKFLNVKDFE
YLGRIKNIKSVIKDQILQSKQMGRREYKIINFEGRVPFDLLLVLIRDYKLRSYSLNAVSY
HFLQEQKEDVHHSIITDLQNGNAQTRRRLAVYCLKDAYLPLRLLDKLMCIIIYMEMARVT
GVSLMSLLTRGQQIKVVSQLLRKMREKNYLMPVHTGRGSDEQFEGGTVIEPKRGYYSDPI
ATLDFSSLYPSIIMAHNLCYTTLLTPEKQNKYDLKIDEVTRTPSNSLFVKSTVRKGLLPE
ILENLLTARKVAKAELKKETDPLKQKVLDGRQYALKVSANSVYGFTGAQMGKLPCLEISA
SVTAYGRTMIEKTKHEVEQHYCINNGYKNDAVVIYGDTDSVMVNFGVKKIEEAMELGKEA
AEYVTSKFIKPIKLEFEKVYFPYLLINKKRYAGLYFTKPDKYDKMDCKGLETVRRDNCPL
VAKMMNTCLQKLLIDRNPEDAIDYAKQIISDLLCNRIDISQLVITKELTKTDYAAKQAHV
ELAAKMKKRDAGTAPKLGDRVPYVFISASKGTPAYQKAEDPIFVLENSIPIDTTYYLENQ
LSKPLVRIFEPILGEKAQSLLLKGDHTRTKIVVTSKVGALAAFTRKKETCIGCKAVLQPK
REKMAVCEHCESREAEIYQTEILAERKLEEKFCRLWTECQRCQGSLHQEVLCTSRDCPIF
YMRKKIQLELDTQIKRIERFGIPEW
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgattagaagacagtattcgggacctggagctgcgaaaaaggccaaatttagccagaat
gacgatgaagatgattaccctggttcatttgaagccgaattggctactatggatgatatg
gatgatcaatgtaatgatttgacacaaattattggcgaacctattgacaactgcgaaatg
acgaatgaaaagccaaaagcaggtccagaacaagaaaatatatctgcaaaatggagtaga
ccgtctccaccagatttaaatccacaaattgatacattaacatttcaacagatagatatt
gatcattatataggtcagccattaccaggaatgccaggtagtaaatttggccctgttgca
atcatgagaatgtttggtgttactgaacaaggaaattctatttgctgtcatgttcatgga
ttttgtccatacctgtttgttacagcaccacagaacttcacaaatgctcattgtaaacct
tttaaggatgcactcgatcaagctgttaagaaagatatgaaatcaaatcaaaataccgtt
caagaagctattttagctgttgaaattgtatataaacaaacggtatatacatatacagga
aatgacaaaaatgcatttttgaaaattactgttgcacttccaaaattaatagcaccttgt
aaaagattactcgaaaaagaaattgtttataacgaatttaatcatacttatacacccttt
gaaacgaatattgattttgatattagatttatggtagacacatcagtagtaggttgttgt
tggattgaattaccaccaaacacatggaaattaagaggtcaatatggacatacattgcca
gtaatatctagatgccagttagaagtagatattgcatgggatgcttttatagctcatcca
gcggaaggtgaatggtctaaagttgcgccatttagaatacttagttttgatattgaatgt
gcaggacgaaaaggtatatttcctgaacctaatcatgatcctgtcatacaaattgcaaat
atggtaataagacagggagaaacagaaccatttctacgaaatatatttactcttaataca
tgtgcacctattgttggttgccaagtacttagttttaacaaagaacaagaacttttgcag
aaatgggctgaatttatacgacagttggaccctgatatttttacaggatacaatattaat
aattttgattttccatatttaattaatcgcgcgaaatttctcaatgtgaaagactttgag
tatcttggtagaatcaaaaatataaagtctgtaattaaagatcagatattgcaaagtaag
caaatgggacggcgtgaatacaaaattataaactttgaaggcagagtaccatttgactta
cttttggtattaattagagattataaattgaggtcctattctttgaatgccgtttcttat
cattttttgcaagagcaaaaagaagatgtgcatcatagtattatcactgatttgcaaaat
ggtaatgcacagactcgaagacgtcttgctgtgtattgtttgaaagatgcatatttacca
ttgagattattagataaattaatgtgtataattatttatatggaaatggcaagagttact
ggtgtatctttaatgagtttattaactcgagggcaacaaattaaagttgtttctcaactt
ttaagaaagatgcgagaaaaaaattatttaatgccagtacacacaggacgtggatcagat
gaacagtttgaaggaggtactgttatagagccgaaacgtggctattatagtgatcctata
gctacattagatttcagttccctgtatcccagtattattatggctcataatctatgttat
acaactttattaacgcctgagaaacagaataaatatgatttaaaaattgacgaagttacg
cgtactccaagcaattcattatttgttaaatctactgttagaaaagggttgcttcctgaa
attttagaaaatcttttgacagctagaaaagttgctaaagctgaattaaaaaaggaaaca
gatccgcttaaacaaaaagttttagatggcagacagtatgctttgaaggtatcagcaaat
tctgtgtatggattcacaggtgcacagatgggaaagttaccgtgtttagaaatttctgct
agtgttactgcttatggacgcactatgatagaaaaaacgaaacacgaagttgagcaacat
tactgtatcaacaatggttacaaaaacgatgctgttgttatttatggtgatacagattct
gttatggttaactttggcgtgaaaaagatagaagaagccatggaactaggtaaagaagct
gcagagtatgttacatcaaaatttattaaacccatcaaattggaatttgaaaaggtctac
tttccttatcttttaataaacaaaaaaagatacgcgggtctttactttacaaagcctgat
aaatatgataaaatggattgtaaaggattagaaacagtgagaagagataattgtccttta
gtagcaaagatgatgaatacttgtttgcaaaaattacttattgataggaatcctgaagat
gctattgattatgcaaaacaaataataagcgatcttttgtgtaatcgtattgacatttca
caattggttataacaaaagagctaacaaagactgattatgctgctaaacaggcgcacgtc
gaattagcagccaagatgaaaaagcgtgatgcaggaactgcaccaaaacttggtgatcgt
gttccatatgtatttataagtgcctctaagggtactccagcttatcagaaagctgaggat
cctatatttgtattagaaaatagtattcccattgatacaacatattatttagaaaatcaa
ttatcaaaaccattagtacgtatttttgaaccaattcttggtgaaaaagcacaatcgtta
cttttaaaaggagatcatactcgtacaaaaattgttgttacttctaaagtcggtgcattg
gcagcattcacacgtaagaaagaaacgtgtattggctgtaaagccgttttgcaaccaaaa
agagaaaaaatggctgtgtgtgagcattgtgaatcacgtgaagcagaaatatatcagact
gaaatattggccgaaaggaaattggaggaaaagttttgtagactatggacagagtgtcaa
agatgccaaggaagcttacatcaagaagttttgtgcactagtcgtgactgtcctatattc
tacatgaggaaaaaaatccaattagagttggatactcaaataaaaaggatcgaaagattt
ggaattccagagtggtaa
DBGET
integrated database retrieval system
