Vespa crabro (European hornet): 124429348
Help
Entry
124429348 CDS
T09462
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
vcrb
Vespa crabro (European hornet)
Pathway
vcrb03040
Spliceosome
vcrb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124429348
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124429348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcrb03041
]
124429348
04121 Ubiquitin system [BR:
vcrb04121
]
124429348
03400 DNA repair and recombination proteins [BR:
vcrb03400
]
124429348
Enzymes [BR:
vcrb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124429348
Spliceosome [BR:
vcrb03041
]
Complex B
Other components
Prp19 complex
124429348
Complex C
Prp19-CDC5 complex
124429348
Ubiquitin system [BR:
vcrb04121
]
Ubiquitin ligases (E3)
U-box type E3
124429348
DNA repair and recombination proteins [BR:
vcrb03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
124429348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
Prp19
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_Vps41
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR41
eIF2A
Tricorn_2nd
Beta-prop_DCAF4
U-box
B-prop_COPA_B_2nd
Beta-prop_Nup120_160
Beta-prop_ACSF4
PAS_11
RMC1_N
Cytochrom_D1
WDR54
Motif
Other DBs
NCBI-GeneID:
124429348
NCBI-ProteinID:
XP_046830471
LinkDB
All DBs
Position
15:2241735..2244521
Genome browser
AA seq
504 aa
AA seq
DB search
MALSCAISNEVPEHPVLSPVSGSIFEKRLIEKYVTENGVDPITGKELTIDQLIDVKTTPI
VKPKPPSATSIPAILKILQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGIVQATVIPQPAVAVEAGGTAAQPMEQAGITDDVIQKLQERA
TVLTQERKRRGRSIPEDLLPQDSIRAFQTLASHPGLHSASVPGILALDIHGADTSKILTG
GADKNATVFNKDTEQVVAILKGHTKKVTRVIYHPEEDIVMTASPDTTIRVWNVATSQTTL
LLKAHDAPVTGLSLHPTGDYLLSSSLDQHWAFSDIRTGRLLTKVAGQAGQPLTTAQFHPD
GLIFGTGTADSQVKIWDLKEQSNVANFPGHSGPITAISFSENGYYLATAAEDSCVKLWDL
RKLKNFKTLQLEESYEVKDICFDQSGTYLAVAGTDVRVYLCKQWQELKVLNDHTATATGV
RFGKHAQYIASTSMDRTLKLYGLP
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggcgctctcttgtgcgatctccaacgaagtaccggaacatcctgttttatctcctgta
tcgggttctatatttgaaaaacgtctcattgagaaatatgttactgaaaatggagtggat
cccatcactggcaaagagttgaccatagatcaattaattgatgtcaaaacgactcctatt
gtaaaacctaaaccaccgagtgccacatctatacctgctattttaaaaatactgcaggac
gaatgggacgctgttatgctacattcatttactcttaggcaacaattacaaacagctcga
caagaattgtctcatgctttatatcaacatgatgcggcttgtcgagtaattgctagatta
acaaaagaagttacagctgcccgtgaggctttggctactcttaaaccacaagctggaatt
gttcaagcaacagttattccacaaccggctgtagctgtagaagctggcggtacagctgct
cagccaatggaacaagctggtattactgatgatgttattcaaaaattacaagaaagagca
acggttctcactcaagaaaggaaacgtcgtggacgttccattcctgaagatcttcttcct
caagatagcatcagagcattccaaactcttgcatctcaccctggtctccattctgctagt
gtacctggaattttggcattggacattcatggtgcagatacaagtaaaattttaactggt
ggtgctgataaaaatgcaactgtatttaataaggatacagaacaagttgttgctatctta
aaaggccacactaagaaggtaactcgagtaatttatcatcccgaagaagatatagtgatg
actgcatcacctgatactacaattagagtatggaatgtagcaacgagtcaaacaacttta
ttactgaaggctcatgatgctccagtaactggattatcattgcatccaactggagattac
ctattaagttcatcattagatcagcattgggcattttctgatattcgtactggaagatta
ttgaccaaggtggctggtcaagctggtcagccattaacgacagcacaatttcatcccgat
ggattaattttcggtactggtacggctgattctcaagtaaaaatctgggatttgaaggaa
caatcaaacgtggcgaatttccctggtcattctggtccaatcacagctattagtttctca
gaaaatggttattatctggctacagctgctgaggattcttgtgtcaaactttgggatcta
cgaaaattgaaaaatttcaaaacattacaattggaggaatcttatgaagtaaaggacata
tgttttgatcaaagcggtacctatctagctgtagctggaacggatgttagagtgtatttg
tgtaaacaatggcaagaattgaaagtattgaatgatcatacagcaacagcgacaggtgta
cgttttggaaaacatgcacagtacatagcatccactagtatggacagaacattaaaactt
tatggtctcccttaa
DBGET
integrated database retrieval system