KEGG   Vespa crabro (European hornet): 124429348
Entry
124429348         CDS       T09462                                 
Name
(RefSeq) pre-mRNA-processing factor 19
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
vcrb  Vespa crabro (European hornet)
Pathway
vcrb03040  Spliceosome
vcrb04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:vcrb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124429348
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    124429348
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vcrb03041]
    124429348
   04121 Ubiquitin system [BR:vcrb04121]
    124429348
   03400 DNA repair and recombination proteins [BR:vcrb03400]
    124429348
Enzymes [BR:vcrb01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     124429348
Spliceosome [BR:vcrb03041]
 Complex B
  Other components
   Prp19 complex
    124429348
 Complex C
   Prp19-CDC5 complex
    124429348
Ubiquitin system [BR:vcrb04121]
 Ubiquitin ligases (E3)
  U-box type E3
   124429348
DNA repair and recombination proteins [BR:vcrb03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    124429348
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 WD40_WDHD1_1st Prp19 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_EML_2 WDR55 WD40_CDC20-Fz WD40_Gbeta Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_Vps41 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_WDR41 eIF2A Tricorn_2nd Beta-prop_DCAF4 U-box B-prop_COPA_B_2nd Beta-prop_Nup120_160 Beta-prop_ACSF4 PAS_11 RMC1_N Cytochrom_D1 WDR54
Other DBs
NCBI-GeneID: 124429348
NCBI-ProteinID: XP_046830471
LinkDB
Position
15:2241735..2244521
AA seq 504 aa
MALSCAISNEVPEHPVLSPVSGSIFEKRLIEKYVTENGVDPITGKELTIDQLIDVKTTPI
VKPKPPSATSIPAILKILQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGIVQATVIPQPAVAVEAGGTAAQPMEQAGITDDVIQKLQERA
TVLTQERKRRGRSIPEDLLPQDSIRAFQTLASHPGLHSASVPGILALDIHGADTSKILTG
GADKNATVFNKDTEQVVAILKGHTKKVTRVIYHPEEDIVMTASPDTTIRVWNVATSQTTL
LLKAHDAPVTGLSLHPTGDYLLSSSLDQHWAFSDIRTGRLLTKVAGQAGQPLTTAQFHPD
GLIFGTGTADSQVKIWDLKEQSNVANFPGHSGPITAISFSENGYYLATAAEDSCVKLWDL
RKLKNFKTLQLEESYEVKDICFDQSGTYLAVAGTDVRVYLCKQWQELKVLNDHTATATGV
RFGKHAQYIASTSMDRTLKLYGLP
NT seq 1515 nt   +upstreamnt  +downstreamnt
atggcgctctcttgtgcgatctccaacgaagtaccggaacatcctgttttatctcctgta
tcgggttctatatttgaaaaacgtctcattgagaaatatgttactgaaaatggagtggat
cccatcactggcaaagagttgaccatagatcaattaattgatgtcaaaacgactcctatt
gtaaaacctaaaccaccgagtgccacatctatacctgctattttaaaaatactgcaggac
gaatgggacgctgttatgctacattcatttactcttaggcaacaattacaaacagctcga
caagaattgtctcatgctttatatcaacatgatgcggcttgtcgagtaattgctagatta
acaaaagaagttacagctgcccgtgaggctttggctactcttaaaccacaagctggaatt
gttcaagcaacagttattccacaaccggctgtagctgtagaagctggcggtacagctgct
cagccaatggaacaagctggtattactgatgatgttattcaaaaattacaagaaagagca
acggttctcactcaagaaaggaaacgtcgtggacgttccattcctgaagatcttcttcct
caagatagcatcagagcattccaaactcttgcatctcaccctggtctccattctgctagt
gtacctggaattttggcattggacattcatggtgcagatacaagtaaaattttaactggt
ggtgctgataaaaatgcaactgtatttaataaggatacagaacaagttgttgctatctta
aaaggccacactaagaaggtaactcgagtaatttatcatcccgaagaagatatagtgatg
actgcatcacctgatactacaattagagtatggaatgtagcaacgagtcaaacaacttta
ttactgaaggctcatgatgctccagtaactggattatcattgcatccaactggagattac
ctattaagttcatcattagatcagcattgggcattttctgatattcgtactggaagatta
ttgaccaaggtggctggtcaagctggtcagccattaacgacagcacaatttcatcccgat
ggattaattttcggtactggtacggctgattctcaagtaaaaatctgggatttgaaggaa
caatcaaacgtggcgaatttccctggtcattctggtccaatcacagctattagtttctca
gaaaatggttattatctggctacagctgctgaggattcttgtgtcaaactttgggatcta
cgaaaattgaaaaatttcaaaacattacaattggaggaatcttatgaagtaaaggacata
tgttttgatcaaagcggtacctatctagctgtagctggaacggatgttagagtgtatttg
tgtaaacaatggcaagaattgaaagtattgaatgatcatacagcaacagcgacaggtgta
cgttttggaaaacatgcacagtacatagcatccactagtatggacagaacattaaaactt
tatggtctcccttaa

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