Vespa crabro (European hornet): 124429989
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Entry
124429989 CDS
T09462
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
vcrb
Vespa crabro (European hornet)
Pathway
vcrb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124429989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcrb03019
]
124429989
Messenger RNA biogenesis [BR:
vcrb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124429989
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
tRNA_lig_kinase
Motif
Other DBs
NCBI-GeneID:
124429989
NCBI-ProteinID:
XP_046831912
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All DBs
Position
17:4049990..4051148
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AA seq
220 aa
AA seq
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MEEDITTTEYMLRPMLCELNHLSMPDGSAMLMQGDTAVIAGVYGPVEPKAQKMIYDKASV
EVVYSPVKGPAKIDDRMIELYVKESCETGIIVMLHPGTAICINIQEIQDNGGLLACTINS
ACLALINSGISMKFTIAAITCMIEKDSDNIILDPNNDQLQNAKAVFTFTYDSIKKDIISC
STTGRFTDKEFLECSDKCRQASSCVFNFYRDVVKRYAKSI
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagatataacaacaacggaatatatgctccgtcctatgttatgcgaactcaat
catctttcgatgcccgatggttcagcaatgttgatgcaaggtgatacagcggtaatagca
ggcgtttatggacctgtagaaccaaaagcgcaaaaaatgatttatgacaaagcttcagta
gaagttgtctatagtcctgtaaaaggaccagcaaagatcgatgacaggatgatagaatta
tatgtaaaggaatcatgcgaaactgggattattgtaatgcttcatccgggtacagctata
tgtataaatatacaagagatacaggataatggtgggctcttagcttgtactattaattcc
gcgtgcttggccttaattaattcaggaatttctatgaaattcactattgcggctatcact
tgtatgattgaaaaagattcagataacattatacttgatccaaataatgatcaattgcag
aatgccaaggcagtttttacttttacgtacgatagtataaaaaaggatattatctcttgt
tctacaacgggacgtttcaccgataaagaatttttagaatgttcggataaatgtagacaa
gctagttcatgcgtctttaatttttatcgtgacgttgtaaaaaggtatgcgaaatcaata
taa
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