Vespa crabro (European hornet): 124430267
Help
Entry
124430267 CDS
T09462
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
vcrb
Vespa crabro (European hornet)
Pathway
vcrb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124430267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcrb03041
]
124430267
Enzymes [BR:
vcrb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124430267
Spliceosome [BR:
vcrb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
124430267
Complex C
U4/U6.U5 tri-SnRNP related factors
124430267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
Cas3-like_C_2
AAA_30
SLFN-g3_helicase
Flavi_DEAD
T2SSE
ATPase
Motif
Other DBs
NCBI-GeneID:
124430267
NCBI-ProteinID:
XP_046832522
LinkDB
All DBs
Position
18:4605927..4610078
Genome browser
AA seq
886 aa
AA seq
DB search
MSKYRRQETSSEDSDSEEERRKKDIKERDEFANRLKAKDDSKTRKVAMPTGSGAAEAAKR
LKLMETDAREKLVPKLRVDSRRKYLEKRKEDKVAELEADIIDDEYLFEEEILTEREKRER
AHKKQLLQLAKEHEKARELERVQRYHMPLEKKKLEAEAEPPDTEPPQSEQSKWESDQMSS
AVFRFGAKDRKAQQDYDLLLEDEIEFIQALRMPGSEKGTKRESSPSPQAKILQTIQETKK
SLPIYPFKNDLIQAIKEHQILIIEGETGSGKTTQIPQYLYESGFAVNDKIIGCSEPRRVA
AMSVAARVAHEMAVKLGNEVGYAIRFEDCTSHRTRIKYMTDGTLHREFLSQPDLASYSVM
IIDEAHERTLHTDILFGLVKDITRFRSDLKLLISSATLDATKFSEFFDDAPIFRIPGRRF
PVDIYYTKAPEADYIDACVVSILQIHATQPPGDVLVFLTGQDEIETCQEMLQERVRRLGS
KLAELLILPVYANLPSDMQAKIFQPTPPGARKVVLATNIAETSLTIDNIVYVIDPGFAKQ
NNFNSRTGMESLMVVPISKASAMQRAGRAGRVAPGKCFRLYTAWAYQHELEDNTVPEIQR
INLGNAVLTLKALGINDLVHFDFLDPPPHETLVLALEQLYALGALNHRGELTKLGRRMAE
FPLDPMMAKMLLASERYRCSEEVATIAAMLSVNGAIFYRPKDKIIHADTARKNFHVPGGD
HLTLLNVYNQWQQSDFSTHWCYENFIQHRSMKRARDVREQLIGLMQRVEMELVSGITETV
NIRKAITAGYFYHVARLSKGGHYKTAKHNQTVSIHPNSSLFQELPRWLLYHELVFTTKEF
MRQVTEIESKWLLEVAPHYYKPKELEDSTNKKMPKVAGRARPDATT
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaatacagaaggcaagaaacctcaagcgaggatagtgatagtgaggaagaaagg
cgtaagaaagatataaaagagagagatgaatttgcgaaccgtctcaaagcaaaagatgat
agtaagacacgaaaagttgctatgcccactggctctggagcagctgaggcagcaaaaaga
cttaaactcatggaaactgatgcaagagaaaagcttgttccaaaactaagagtagactcc
cgtagaaaatatttagaaaaacgtaaagaggataaagtggccgaattagaagcagatatt
attgatgatgaatacctgtttgaagaagaaattttaacggaacgtgaaaagcgtgaaaga
gcacataagaaacaattattacaattggcaaaggaacatgaaaaggcaagggaacttgaa
agagtacaaagatatcatatgcctttggaaaaaaagaaattagaagctgaggcagaacca
cctgatacagaaccacctcaatccgaacaaagtaaatgggagtccgatcagatgtcatct
gctgtatttagatttggggcaaaagacagaaaagcacaacaggattatgatcttttattg
gaggatgaaatagaatttattcaagcactgcgtatgcctggaagtgaaaaaggtacaaag
cgtgaatcaagtccatctccgcaggctaaaattttacaaaccatacaagaaacaaaaaag
agcttaccaatatatccatttaagaatgatcttattcaagctatcaaagaacatcagatt
ctgatcatagaaggtgaaacaggttcaggaaaaactacacaaattccacaatatttatac
gaatcgggttttgcggtgaatgacaaaattattggttgtagcgagcctcgcagagtggca
gcgatgtctgtagccgctagagtggctcatgaaatggctgtaaaacttggaaacgaagtt
ggttatgcaattcgtttcgaagattgcacgtcccatcgtacgcgtataaaatacatgact
gatggcacattacatcgcgaattccttagtcaacctgatttagcgtcatatagcgtaatg
ataattgacgaagcacatgagcgcacattgcataccgacattttatttggcttggtcaag
gatattacaagatttcgttcagacttgaaattattaatttcttctgcaacgttagatgca
acaaagttcagcgaattcttcgacgatgctccaatttttcgtatacctggccgtcgtttt
cctgtagatatatattatacaaaagcacctgaggcggattatatcgatgcatgtgtagtc
tctattcttcaaattcatgcgacccaaccgccaggagatgtgctagtatttctaactggt
caggacgagattgagacgtgtcaagagatgttacaagagagagtaagaaggctgggaagt
aagttggcggaacttttgatattacccgtttatgcgaacttgccaagtgatatgcaagct
aaaatatttcaacccactccacccggtgctagaaaggttgttctggctactaacatagca
gagacgtctttgaccattgacaatatcgtttacgtaatagatcctggatttgcgaagcag
aataattttaattcgcgaacaggaatggaaagtttgatggttgttccgattagtaaagct
tctgcgatgcagcgagcaggtcgtgctggcagagtagcacccggtaaatgtttcagactt
tacacagcatgggcatatcagcacgagttggaggataatactgtacctgaaatacaaagg
ataaatcttggtaatgcagtgctcacattaaaagccctaggtattaacgatttagttcac
tttgattttctcgatccaccgccgcatgaaacattagtattagctttagagcaactttat
gctttgggtgctctcaatcatcgcggtgaattaactaaactcggccgacgaatggcagaa
tttccacttgatccaatgatggcaaaaatgttgttagccagcgaacgttatcgttgctcc
gaagaggtggccacaatagctgcaatgctttctgtaaacggagcaattttctatagacct
aaagataaaattatacatgcagatacagctagaaaaaattttcatgttcctggcggagat
catctcactctcctaaatgtttataatcagtggcaacaaagcgattttagtactcattgg
tgttacgaaaattttattcagcatagatcgatgaaacgagccagagatgttagggaacag
ttaataggcttgatgcaacgtgttgaaatggaacttgtctcgggtattacagaaaccgtt
aatattcggaaggcaattacggcaggttatttctatcacgtggctcgtttgtcaaaggga
ggccattataaaacagcaaaacataatcaaactgtatcgattcatccgaatagttcttta
tttcaagaacttccgcgatggttgctttatcacgaattagtatttacaacgaaagaattc
atgcgacaggttacggaaatagaaagcaaatggttgttggaagttgcaccacattattac
aaacccaaagaacttgaagactcgacgaataaaaaaatgcctaaagttgcaggcagagca
cgaccagatgcaactacctaa
DBGET
integrated database retrieval system
