Vespa crabro (European hornet): 124430394
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Entry
124430394 CDS
T09462
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
vcrb
Vespa crabro (European hornet)
Pathway
vcrb04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124430394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcrb03036
]
124430394
Chromosome and associated proteins [BR:
vcrb03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
124430394
REST complex
124430394
Heterochromatin formation proteins
Other heterochromatin formation proteins
124430394
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
SPCC191_01
Motif
Other DBs
NCBI-GeneID:
124430394
NCBI-ProteinID:
XP_046832845
LinkDB
All DBs
Position
18:complement(403503..426599)
Genome browser
AA seq
1556 aa
AA seq
DB search
MKRVRGLDEVASPAATLKPSSVSGGSGLSGGGGLEYHSSSGIGVVVPGQAVRSVTSKEMP
GSIQFGTAQAQQQYTGAIVVPTATPSPIKGTGSTGGLNSTCSGTNVNTGGGLHGGISSGS
NHNMGSQQPTTGSQTQVHTQQQAAIRHKVHSSNVAPLASTPPGPGLGSGSGSQQFQRLKV
EDALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRVSHLFKGHPELIVGFN
TFLPPGYKIEVQANEQGYAFQVSVSMPSPTATHTATLSQHHCTVNVGSPPVASPPTQPAK
APPVLQIMQGSGSIHHALTNNISNSSITVHAPSPPPIQAYNNSHVSAAQAQAVSQALSQA
QDGIPTSGQTQQSQPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRNLKESG
HISGTSGGSAASNVKHLTEAEVYSQVAKLFENQEDLLAEFGQFLPDATNQQSSLVSPVIE
RCMLYNSAMFQSNKTAPVNDHTAIIKKPLSLKATYNNSANVSRDLRESSGTCILERDSRD
HRDRDRERDRPGVREISTGQKLGHSTGQLKRSPSFSTSVTGGNSHIQHGPPPLKKHKVTS
MRDVTIAEAGKYGTLNDYAFFDKVRKALKSQEVYENFLRCLVLFNQEIVSKSELLQLVTP
FLGRFPELLRWFKDFLGHLSDSSNTSANNTGSSIGVEALPNNVARGHQERPQGDLAMEID
YTACKRLGASYCALPKSYVQPKCTGRTQLCKEVLNDTWVSFPTWSEDSTFVTSRKTQYEE
FIYRCEDERFELDGVIETNASTIRVLEGVHKKMNRMSQEELQKFKLDDCLGGCSPTIHQR
ALKRIYGDKAADIIEGLKKNPVVAVPVVLRRLKSKEEEWREAQKGFNKIWREQNEKYYLK
SLDHQGINFKQNDVKALRSKSLFNEIETLYDERHEQVDDGSGDNQGNSGPHLVLPYKDKS
VLDDAANLLIHHVKRQTAIHKEDKQRIKLLLKHFIPDLFFHPRQELSDDERDEDDDKEDV
GVAACSNSQSVTMSTSPHGGLQANRSKAPLSPVLSSTSVKVEPDIKIPMHALSNDPEEAY
TLFMGSNNWYLFLRLHHILCERLTKMYERAVALAEEESRYKQQRKESTAVALRLKPKNEI
EIEDYYPAFLDMVKNVLDGNMESTAYEDTLREMFGIHAYIAFTLDKVVTYAVRQLQHLVS
DPICQQCMELFQREQRQPKESSGAGGLCVTAYMRLGAELSYQRKAEKAMADENCFKIYIY
KKDCKMTMELLDTEGDEAMDSGCREREREGVMVSEKWSTYVERFSAPPGQTSPKDTSAVV
DNEPTTNHPVSSDQAARGVRGRKRKNTDISKKMDGHSWNSLSRILAGRKPVFLYRNVRQW
RKRAAKLMRASMPNTNHPEKASDVSNKDKALDSVSALLKRPSGLRLTDTGDTSEIIAADE
TQCRFNPNSYQMLYVASKEAFLYKQNSFSRARECHPAVTKHLNSKFHHWLSSWASKNVAD
VQHRLCQDWLMGRYENLIPHRTRVITDNDQTRSPYRQYNRYRVERLQSDVLTEPCV
NT seq
4671 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgttcgcgggctggacgaggtagcgtcaccagcagcaacgttaaaaccctcg
tcggtgagcggaggaagtggtctaagcggtggtggaggtttagagtatcactcaagtagc
ggaataggcgttgttgtacctggtcaagctgttcgatctgttacttcaaaggaaatgccg
ggaagtatacaatttggtaccgcccaagctcaacagcagtataccggtgcaatcgttgta
ccaacggctacaccatcccctattaaaggaactggatctacaggagggcttaattctaca
tgtagtggtactaatgtaaatactggtggtgggttgcacggtggaataagtagtggaagt
aatcacaatatgggctctcagcaacctacaacaggatcgcaaacacaagttcacacacaa
cagcaggcagcaataaggcacaaggtacattcgagcaatgtagcgccattggcatctaca
cctccaggtcctggattaggcagtgggagtggatctcaacaatttcaaagattaaaagtt
gaagatgcattatcttatttggatcaagtgaagtataaattcagtgatcaaccacaggtt
tataatgatttcttggatatcatgaaagaattcaaatctcagagtattgataccccaggt
gttattacacgagtgagccatttatttaagggacaccctgaactcattgttggtttcaat
acttttctaccaccaggctacaaaatagaggtacaagcaaatgagcaagggtatgcattc
caagtatcagttagtatgcctagtccaactgctactcatacagcaacgttatcgcaacat
cattgtacggtgaatgttggttcaccacctgtagcaagtccgccaacacaaccagcaaaa
gcaccaccagttttgcaaataatgcaaggatctggaagcatacatcatgccttaacaaat
aatatttccaatagtagtataacggttcatgcaccgtcaccgccacctattcaagcctac
aacaattctcatgttagtgctgcacaagctcaggcagtaagtcaagctcttagtcaagct
caagatggtattccaactagtggtcaaacgcaacaaagtcagcctgtggaatttaaccat
gctattaactatgttaataaaataaagaatcgctttcaaggacaaccagataaatacaaa
aggttcctagagatactacatacttatcaaaaagaacaacgcaatttgaaagaatcagga
catataagcggtacaagtggtggtagcgctgctagtaacgtaaaacatttaacagaagct
gaggtttatagtcaggttgctaaattgtttgaaaaccaagaagatttacttgctgaattt
ggtcaatttttaccggatgcaactaatcagcagagttcgttggtgagtcctgtgatcgaa
agatgcatgctatataattctgctatgtttcagagtaacaagactgctccagtaaatgat
catacagcaataataaagaaaccattgagtcttaaggcgacttataacaactctgctaat
gtttcacgagatcttcgggaatcaagtggcacttgtatattggagcgtgatagcagagat
cacagggatcgtgatcgtgagagggataggccaggtgttcgagaaatcagcactggtcaa
aaattgggtcacagtacagggcagctaaaaagaagtccatcattctctacttctgttact
ggtggcaattctcatattcaacatggaccacctccattaaaaaaacacaaagtaacatca
atgcgagatgttactatagcagaagccggaaaatatggtacattgaatgactatgcattt
tttgataaggttcgtaaggctttgaagtcacaagaggtttatgaaaactttcttcggtgt
cttgtactttttaaccaggaaattgtttctaaatcagaattgttacaattagttacacca
tttctcggtcgttttccggaacttttacgttggtttaaagattttcttggtcatttatct
gattcttccaatacgtcagcaaataatacaggaagtagtataggagtcgaagcacttcca
aataatgtagcgcgtggtcaccaagaacgacctcagggtgacttggcaatggaaattgat
tatacagcatgtaagcgattaggagcttcatattgtgctttgcctaagtcttatgtacaa
ccaaaatgtactggtagaacgcaattgtgcaaagaagttttaaatgatacatgggtatca
tttccaacttggtcagaggatagtacatttgttacatcgagaaaaacacaatatgaggaa
tttatttatcgttgtgaagatgaacgatttgaattagatggcgtgatagaaactaatgca
tcaactattagagtattagaaggtgttcataaaaaaatgaatagaatgagccaagaagaa
cttcaaaaatttaaactcgatgattgtcttggaggttgttctcccacaatacatcaacga
gcattaaaaaggatatacggagataaagctgctgatattatagaaggtcttaaaaaaaat
cctgtagttgcagttccagtcgttttacgacgcttgaagagtaaggaagaggaatggcga
gaagctcagaaaggttttaataaaatttggagagaacaaaatgagaagtactatttgaaa
tctttagatcaccaaggtattaattttaaacaaaatgatgtgaaagctttaagatccaaa
agtttattcaatgaaattgaaactttatatgatgagagacatgaacaggtagacgatgga
agcggtgataatcaaggaaatagtggtccacatttagtgttaccttataaagacaaatct
gtcttagatgatgcagcaaatttattgatacatcatgtaaaacgacaaactgctattcat
aaagaagataaacagcgtataaagcttttacttaagcattttataccagatctctttttt
cacccacgccaagagcttagcgatgatgagagagatgaagatgatgacaaagaggatgtg
ggtgtggcagcatgtagtaattctcaatctgtaaccatgtctacatcgccacatggcggt
cttcaagcaaataggagtaaggccccactttccccagtcctgtcttccacttcagttaaa
gtcgaacctgatatcaaaatacctatgcatgccctgtcaaatgatcctgaagaggcatat
actcttttcatgggcagtaataattggtacctctttttgaggttacatcacatcctctgt
gaaagattaactaagatgtatgagagagcggtagcccttgcagaagaagagtctagatac
aaacagcaacgtaaggagagtactgctgtggctctcaggttaaaaccaaaaaatgaaata
gaaattgaggattactatcctgcctttttggatatggtgaaaaatgttttggatggaaat
atggagagtacagcgtatgaagataccttgcgtgaaatgtttggtatacatgcatatatt
gcctttactttggacaaagttgtgacatatgctgtgagacaattgcagcatttagtgtct
gatcctatatgccagcaatgtatggagctatttcaaagagaacaacgtcagccaaaagaa
agtagtggagctggtggattatgtgttacagcttatatgaggcttggtgcagagctttca
tatcaacgtaaggcagaaaaagcaatggctgatgaaaattgtttcaaaatatatatatat
aaaaaggattgtaaaatgacaatggaactgttggatacagagggtgatgaagcaatggac
agtggttgtagagagagagaaagagaaggagttatggtatctgagaaatggtcaacatat
gtggagaggttctctgctccgcctggtcaaactagcccgaaagacacttctgctgtggta
gacaatgagccaacgaccaatcatcctgtgagtagtgaccaggcagcaaggggggttcgg
ggcagaaagcgcaagaacactgacattagcaagaagatggatggacatagttggaattct
ttaagcagaatcttggcaggacggaaaccagtatttttgtatcgtaatgtcaggcaatgg
cgtaagagagctgcaaaattaatgagggcatctatgcctaatactaatcatccagaaaaa
gcttcggatgtatccaataaagataaagcattggatagtgtcagtgcacttttaaaaagg
ccatcaggcttaaggttgacagatactggtgacacatctgaaattattgccgctgatgaa
acacaatgtcgttttaatccaaatagttatcagatgctttatgttgctagtaaagaggct
ttcctttataaacaaaattcttttagtcgtgctagagagtgtcatccagcagtgacaaaa
catttaaattcgaaatttcatcattggctttcatcgtgggcatctaaaaatgtcgcagat
gttcaacatcgattgtgtcaagattggttaatggggcgatatgagaacttgatccctcat
agaacacgtgttattacggacaatgatcaaacgcgatcaccatatcgacagtataatcgg
tatcgcgttgaacgtttacagtcggacgttcttacagaaccatgtgtgtaa
DBGET
integrated database retrieval system
