Vespa crabro (European hornet): 124431218
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Entry
124431218 CDS
T09462
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
vcrb
Vespa crabro (European hornet)
Pathway
vcrb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124431218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcrb03021
]
124431218
03036 Chromosome and associated proteins [BR:
vcrb03036
]
124431218
Transcription machinery [BR:
vcrb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124431218
Chromosome and associated proteins [BR:
vcrb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124431218
PBAF complex
124431218
GBAF(ncBAF) complex
124431218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_3
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
124431218
NCBI-ProteinID:
XP_046834796
LinkDB
All DBs
Position
20:3149324..3157573
Genome browser
AA seq
986 aa
AA seq
DB search
MLALGPKKDGGPNAKFFDSAEILAQLDGVKQWLLKNCKKYVQTDPPTNKTLATLVVQLLQ
FQEDNLGKNVTKPPMTRLPMKCFLDFKPGGGLCHILSTAYRFKQEQGWRRFDFPVGKSGS
RMDRIVEMLMAAERALTQNRCLTIPSVFVRADVDKSTATKVKEAVRRHQGTVVENEADAT
HIIFPPVDPMEEECARPCMRRERSVLLHWYYFPDSYDSWTTLDLPWEFPEGTLNITSTRS
VYKVSATWALDLDQYNEWMNEEDYEVDDSGQKKVHKYRLLVEDLMAQPAHPPPGKKPKRK
RSPSPPPKVGKRKSSRAPSNIQSTSSTSSAATPKKSRGGGDEEEDLTQGMEDPPAEPRIV
EVVAAPANPPVTGQSSNATTSSSLASTGNKKQDNELQPLKSGNMADLDEPMEGDKGSSQG
TQDREERDTSKERGEGGKGDEPEDNVTEQTHHIVVPSYSAWFDYNSIHTIEKRALSEFFN
GKNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLIN
YQVDAESRPTPMGPPPTSHFHVLSDTPSGLAPVNPNPPKTPQPSAAKTLLDLEKKSTTAL
GVEEKVSASAMTNFGLKIDQYSRKPAVLKNKQAAGATRDWTEQETLLLLEGLELHKDDWN
KVCEHVGSRTQDECILHFLRLPIEDPYLEEGGPEGLGPLAYQPVPFSKAGNPVMSTVAFL
ASVVDPRVAASAAKAAMEEFAAIKDQVPAALLDQHLRNVQASANSEGKFDPAAGLAQSGI
AGTGPPEPPDDTTTPSTAGTQATAVTSPHSTGPASIETKKEDPEKSKDSSDVEQSPLEIT
KKEDESKESEDDTKSSIDAEAIEAKEKKDKVVRDAQLQSAAAAALAAAAVKAKHLAAVEE
RKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLRA
AEFRARQQAHQRLAQEQQQHTPPEQT
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgcttgcgttaggcccaaaaaaggatggaggacccaatgccaaattttttgattctgcg
gaaattctcgcacaacttgatggggttaaacagtggctcctgaaaaattgcaaaaagtat
gtacaaacagatcctcctactaataaaaccttagcaactttagtggtacaattacttcaa
tttcaagaggataatttaggaaaaaatgtaactaaaccacctatgacaagacttccaatg
aaatgtttcttagactttaaacctggaggaggtttgtgtcatatactttccactgcttat
cgatttaagcaagaacaaggatggcggagatttgactttccagttggaaagtcaggatct
cgtatggatcgtatagtagaaatgttaatggcagcagagcgtgctttaactcaaaataga
tgtttgactataccaagcgtttttgtaagagctgacgtcgataaatcaacagctacaaaa
gtaaaagaagcagtaagacgacatcaaggcacagttgttgaaaatgaagcagatgctaca
catattatttttccaccagtagatccaatggaagaagaatgtgcacgaccatgtatgaga
cgtgaaagatcggttcttcttcattggtactacttcccagatagttatgactcttggact
actctagatcttccttgggaatttcctgaaggaactcttaatattacaagtacaagatcg
gtatataaggtatcggcaacatgggcgcttgatttagatcaatataatgaatggatgaat
gaagaagattatgaggtagatgatagtggacaaaagaaagttcacaaatatagactttta
gtagaagatttgatggcacaacctgctcacccaccaccaggaaaaaaaccaaaaagaaaa
agatcacctagtcccccaccaaaagttggaaaacgcaaaagtagcagggctccatcaaat
atacaaagcacttcatcaacttcttcggcagctactccaaaaaaatcacgcggtggtggg
gacgaagaagaagatcttactcaagggatggaagatccaccagcggaacctcggattgta
gaggttgttgctgctcctgctaatccaccggttacaggtcaaagtagtaatgcaactaca
agcagtagtttggcatcaactggaaataaaaaacaagataatgaactacaacctcttaaa
tccggcaatatggcagatttggatgaaccaatggaaggtgataaaggaagttctcagggt
actcaagatagagaggaaagagatacaagcaaagaaagaggagaaggaggtaaaggagat
gagccagaagataatgttacggaacagacacatcatatagttgtacctagttattctgct
tggtttgattataattcaattcatactattgaaaaaagagcattatctgaatttttcaat
ggcaaaaacaaatctaaaacaccagaaatttatcttgcatatagaaattttatgatcgat
acatatcgattaaatccgacggaatatatcacatcgacagcatgcaggcgtaatttagct
ggtgacgtttgtgcgattatgcgcgtacatgcttttctggaacaatggggtcttattaat
tatcaagtagatgcagaatccagaccaacgcctatgggtccacccccaacatctcatttt
catgtattatcagatactccatcgggtcttgcaccagttaatccaaatccaccaaaaacg
ccacaaccatcggcagcaaaaacgttgcttgatcttgagaagaaatctactacagcgctc
ggtgtcgaagaaaaagtttcggccagtgctatgacaaactttggtttaaaaattgatcag
tattctaggaaaccagcagtgttaaagaacaaacaagcggccggggcaacgcgcgattgg
acggagcaagaaacacttttattattagaaggtttagaacttcataaagatgattggaat
aaagtctgcgaacacgttggttctagaacgcaagatgaatgcatattacatttcttacga
ttacccatagaagatccgtatcttgaagaaggtggtccagaaggtttaggacctcttgca
tatcagccggtacctttctcaaaggctggaaatccggttatgagtacggtcgcatttttg
gcttcggtcgtagatcctagggtggcagctagtgcagcaaaagctgctatggaagaattt
gctgctattaaagatcaagttccagctgcgttattagatcaacatttgcgaaatgttcaa
gctagtgccaattcagaaggaaaatttgatccagctgctggacttgcacaatcaggtatc
gctggtacgggaccacctgaaccacctgacgatactacaacaccatcaacagctggtacc
caagcaacagcagttacttctcctcattcaacaggtccagcttctatagagacaaagaaa
gaagatccagaaaaatcaaaggattcatcggacgtagaacaatccccattggagataacg
aagaaagaggacgaatctaaagagagcgaagacgatactaaatcttctattgatgctgaa
gctatagaggcaaaagaaaagaaggataaggttgtcagggatgcccaattacaatccgca
gcagcggcggcattagctgctgctgccgtgaaagcgaaacatttggcggctgtagaggaa
cgcaaaataaaatctttggtcgcgttactggttgaaactcaaatgaaaaaattagaaatt
aaattacgtcattttgaagaattagaaacaacgatggaacgcgaacgcgaaggactcgaa
tatcaaagacaacaacttattaccgaaagacaacaatttcatttagaacaattgagagca
gctgaattcagagcacgacaacaggcacatcaacgtttagcccaagaacaacaacaacat
actccacctgagcagacataa
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