Vespa crabro (European hornet): 124431360
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Entry
124431360 CDS
T09462
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
vcrb
Vespa crabro (European hornet)
Pathway
vcrb03022
Basal transcription factors
vcrb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124431360
09124 Replication and repair
03420 Nucleotide excision repair
124431360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcrb03021
]
124431360
03400 DNA repair and recombination proteins [BR:
vcrb03400
]
124431360
Transcription machinery [BR:
vcrb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
124431360
DNA repair and recombination proteins [BR:
vcrb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
124431360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Voldacs
Motif
Other DBs
NCBI-GeneID:
124431360
NCBI-ProteinID:
XP_046835149
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All DBs
Position
21:1476024..1479486
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AA seq
560 aa
AA seq
DB search
MTTSSEDVLMQVGQVRYKKGDGTLYVMNERIAWMLDNRDTVSVSHKYADIKLQKISPEGK
SKIQLQVVLHDGSSSTFHFVNRNGQEAQIKDRDDVKELLQQLLPKFKRKVNKELEEKNRM
LQENPVLLQLYRDLVIPQVITSEEFWTQHAAEYTRAKKVQRQEIGVNGAFLADIKPQTDG
CNGLKYNLTIDVIECIFKTYPAVKRKHQENVPHKMTEADFWTKFFQSHYFHRDRINAGTK
DLFTECAKIDDQELKKDIQSGINDPLVDITSFEDQTLDENYGSGLSKSDKTSGNIVHQSM
IKRFNQHSIMVLKASTTKQSTQNSQPQLNGSTPSVSKASTNDQPDIQPKNKKLRIQEKLI
YDDLDASCDSNTNNGAPLCLTHVDRYLHGPVPGYGMTEAPSDELLMAVNQLQKEAASWIS
GNGLPRQAPTSLVSPAAAVSALGELTPGGSLMKSFREESLGQLIPKDLETELRNVYVCIC
QLLRHFWRSFPPTTPQLEEKAIRMHEALHRFHSVKLKPFEDRVQREFSAISQHLTSHLNQ
LLNTAYRKFALWQQRKMQMR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgactacatcatcggaagatgttttaatgcaagtgggacaagtacgttataagaaggga
gatggtacattatatgttatgaatgaacgaatagcttggatgctcgataatagggatact
gtatctgtcagtcacaaatacgctgacattaaattacaaaagatatcacctgaaggaaaa
tcaaaaatacagttacaagtggtactacatgatggatcctcgtctacgtttcattttgta
aatcgtaatggacaagaagcacaaattaaagatcgagatgatgtcaaagaattacttcag
caactattaccaaaatttaaaagaaaagtaaacaaagaattagaagaaaaaaacagaatg
ttacaagaaaatcctgtcttgttacaattatatcgtgatttagtaataccgcaagttatt
acttctgaagaattttggactcaacacgctgcagaatacacacgtgctaagaaagttcaa
cgtcaagagataggtgtcaatggtgcttttttagctgatattaaaccacagaccgatggt
tgtaatggactgaaatataatctaaccatagacgttatagaatgtatatttaaaacttat
ccagcagtcaaaagaaaacatcaagaaaatgtacctcataaaatgacggaagcagatttt
tggacaaaattctttcagtctcattattttcatcgggatcgtatcaatgcagggaccaag
gatctatttaccgaatgtgccaagatagatgatcaagaacttaaaaaagatattcaatct
ggaataaatgatcctttggttgatataacttcctttgaggaccaaacattagatgaaaat
tatggaagtggcttaagtaaatccgacaaaacttcagggaatattgttcatcaaagtatg
atcaaaagatttaatcaacatagtattatggttttgaaagctagcactactaaacaatct
acacagaattctcaaccacagttaaatggatcaacgccatctgtaagcaaagcttccacc
aatgatcaaccagatatccagccaaagaataaaaagcttaggatacaagagaaattaatt
tatgatgacctcgatgctagctgtgactcaaatacaaataatggtgcaccattatgttta
acacatgtagataggtatttgcatgggcctgtgccaggatatggaatgacagaagcaccc
tcagatgaacttttaatggcagtaaatcaattacaaaaagaagcagcttcttggatttca
ggaaatggtttgccaagacaagctcctacttcattagttagtccagctgcagctgtatca
gctttaggagaattgacacccggtggatctcttatgaaaagctttagagaagaaagtctt
ggacagttaataccaaaggatttggaaacagaattacgtaatgtatatgtttgtatatgt
caactattaaggcacttttggagaagttttccacctacaacaccacaacttgaggagaaa
gcaattaggatgcatgaagctttacatagatttcattcggttaaacttaagccatttgaa
gatcgtgttcaaagagaattttctgcaattagtcaacacttaaccagtcatttaaatcaa
ttattgaatactgcatatagaaaatttgcactatggcaacaacgtaaaatgcaaatgagg
tag
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