Vespa crabro (European hornet): 124431458
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Entry
124431458 CDS
T09462
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
vcrb
Vespa crabro (European hornet)
Pathway
vcrb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124431458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcrb03019
]
124431458
Messenger RNA biogenesis [BR:
vcrb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124431458
mRNA degradation factors
5'-3' decay
Decapping complex
124431458
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ctf8
Motif
Other DBs
NCBI-GeneID:
124431458
NCBI-ProteinID:
XP_046835355
LinkDB
All DBs
Position
21:3945544..3949190
Genome browser
AA seq
728 aa
AA seq
DB search
MADSFFGFDTTLLDGIEDGLDCPLEEDDFGEEEYDALNDETFGSEATIGDWEKDHEKLAE
ITESSRSQHKNASDKKNGISVNIEDSLSHLVLDEKEGIVPKPGVWDSPNIPLPKPRPPPS
LATTLKNVCTVEELERGLIANRPPPGLTKPSQLQQQKPEGSFIFEALSLNDKLQINGLPT
SRFPPGLGLPGPHPMVMPPNLRLPHSQFMQHPRLLSNQPANVLRYPLPPHVMLPQGTPRQ
PIHGPFTSNFHHPPHPNLGPPQFLRQDHPMMPPFSSNQAGHQQHSFPHPGNQRNQNRLFY
SNEQQGNHQPFFKNNQYLHRNHDRNNQRYYHYQHHNHPQGINGLNNSGEYDEYAGLMSSR
EKQWLINIQLLQLNTNQPYVDDYYYTVFCDRQNKLNANQDQKDKKHNNNNGFQKDSRNRE
QPQHVASKVVYIPAQFENSLGKLQFSSVTAPRKIIDMDVVPNSDPHSTLQSQQKDTKKTR
QLFLEIERMYTILLKIEDLNNPLAVLSEQQQQDSETETNIVKKTGAELICMMLTSISQLI
QDDKIASMLSIRKGKTLLLRFLPLLNVIEYNSQLEGLWTCILRSLAIIGRRDTHLLTNFY
AEFRRWLDTVQDFNTVLRLTRALSESATQPVKNNSLVFALVNKFGVSVLAALLERAEKLY
PTNETLSSDWSNFIITLVELIGDTSPCVAPCQPVAASTLNQHLSRISSLKIDRYRVLELL
LTDANSSR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggcagactcttttttcggtttcgacacaacgctcttagatggtatagaagatgggctt
gattgcccattggaggaggatgattttggtgaggaggaatatgatgcattaaacgatgaa
acctttggttctgaagctaccattggagattgggagaaagatcatgagaaacttgcagaa
attacagagtctagtaggtcgcagcataaaaatgcttctgataaaaagaatggtatcagt
gtcaacatcgaagatagtttatcgcatttagtattagatgagaaagaaggaattgtacct
aaaccaggtgtatgggatagtcctaatataccattacctaaacctcgaccacccccttct
ttggcaactaccttaaaaaatgtatgtacagtggaagaactggaacggggtcttatcgct
aatagacccccacctggtcttacaaaaccatctcaactgcaacaacaaaagccagagggg
tcatttatttttgaagctttatcattaaatgacaagcttcaaatcaatggcctacctact
tctcgatttccaccaggattaggtttacctggtccacatcctatggttatgccaccaaat
ttaagattaccgcattcacaatttatgcaacatcctagattattatctaatcaacctgct
aatgtattgcggtatcctttaccaccacatgttatgctaccgcaaggaacaccaagacag
ccaattcatggaccatttactagtaattttcatcatccacctcatcctaatttaggacct
ccacagttccttcgtcaagatcatccaatgatgccaccattttctagtaatcaagctggt
caccaacaacattcttttccacatcctgggaatcaaagaaaccaaaatagattattttat
tccaatgaacaacaaggaaatcatcagccattttttaagaataatcaatatcttcatcgt
aatcacgatagaaataatcaaagatattatcactatcaacatcacaatcatcctcaaggt
ataaatggtttaaataattctggagaatatgacgagtatgctggtcttatgagtagcaga
gaaaaacaatggttgatcaatattcaattgctacaattaaatacaaatcaaccatatgtt
gatgattattattatacggtattttgtgatagacaaaataaattaaatgcaaaccaagat
cagaaagataaaaaacataataataacaatggatttcaaaaagattctagaaatcgcgaa
caacctcaacatgttgcatcaaaagttgtatatatcccagcacaatttgagaattcatta
gggaagctgcaatttagtagtgttactgcgcctcgtaaaattatcgatatggatgttgtt
cccaatagtgatccacattcaactctgcaatctcaacaaaaagacaccaaaaagacgaga
caattgtttcttgaaattgaaaggatgtatacaatactgttgaaaattgaagatttaaat
aatcccttagctgtgctttcggaacaacaacaacaggatagtgaaacagaaacaaacatt
gttaaaaaaacaggtgctgaactaatctgcatgatgttaacgtctatttcccagctaata
caagatgacaaaatagctagtatgcttagtattcgtaaaggaaaaacattgctattgaga
tttttacctcttttaaatgtaatcgaatacaatagccagttggaaggtttatggacctgt
atattgagaagtttagcaattataggtcgtagagatacacatttattgacaaatttttat
gccgagtttcgaaggtggcttgacactgtacaggattttaatacagtactacgacttaca
agagcattatccgaatctgctactcaacctgtgaaaaataatagtttagtttttgctctc
gtaaataagtttggtgtatctgtattagccgcacttttggaacgcgcagagaagttatat
cctacaaatgaaactttatcttctgattggtccaattttataataactcttgttgaacta
attggtgatacatcaccttgtgtagctccctgtcaaccagttgctgcaagtacacttaat
caacatttaagtcggatttccagtttaaaaattgacaggtatagagtgttagaacttttg
ttaactgatgccaactcttcacgatag
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