Vespa crabro (European hornet): 124431467
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Entry
124431467 CDS
T09462
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
vcrb
Vespa crabro (European hornet)
Pathway
vcrb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124431467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcrb03041
]
124431467
Spliceosome [BR:
vcrb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
124431467
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
PRP4
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Ge1_WD40
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
WD_LRWD1
WDR54
Motif
Other DBs
NCBI-GeneID:
124431467
NCBI-ProteinID:
XP_046835375
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Position
21:complement(103620..106184)
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AA seq
555 aa
AA seq
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MSDDEDLVYVKKQKIVHYGSLEEAERTRLAAAAECSEEEKEATNSNDAVNVSTLAGNIHI
SNEYMELEDEMSKDRQALLEEFERRKKARQINVSTDDSEVKKNLRQLGEPICLFGEGPAD
RRTRLRELLASLGEDAIKKKHEEEEKPAHTVERDTESTWYHEGPESLQIARYWIATFSLA
RAKIRLEKARQDFELPGATRTARRQELLKKLQALSIYCSQIGDTRPISFCQFSPNSKILA
TASWSGLCKLWSVPDCTLLRTLQGHTYNVSCIVFHPNVSLSEEVLGDGAGQTCVLASCAS
DGTLDESLGSRRVVDIWRNLFTSFLRVIVLTGTVKLWSGGKGEEPLAEVEGHEPHRVSRI
AFHPSGRFLGTCCYDASWRLWDLEQQAEVLHQEGHARAVHCMSFQWDGSVNATGGHDSFG
RVWDLRTGRCIMFMEGHLKSILGIDFSPNGYHIATASEDNTCKIWDLRKRSCIYTIPAHT
NLLSDVKYQRGEGQYLVTSSYDNTAKIWSNKTWQPLKTLPGHDGKVMSVDVSPDHKFIAT
SSYDRTFKLWAPENI
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgacgaagatttggtgtacgtgaagaaacaaaaaattgtacattatggatcc
ctcgaagaagcggaacgtacccgtcttgccgctgcggcggaatgttcggaagaagaaaag
gaagctactaattctaatgatgctgtcaacgtatccaccttggccggtaatatacacatc
tccaatgaatacatggaattggaagatgaaatgtctaaagataggcaagcgttgttggaa
gagtttgaacgtagaaagaaagctagacagatcaatgtatccacggacgattcggaggta
aaaaagaatttaagacagttgggcgagcccatatgtttgttcggcgaaggccctgcggat
agacgaacgagattaagagagttactggctagtcttggggaagacgcgataaagaagaaa
cacgaagaggaggagaaacctgctcacacggtcgaaagagacaccgaatctacttggtat
cacgaagggccggaatctctacaaatagctcgttattggatagcaacattttctttggcc
agggcaaaaattaggttggaaaaagcaagacaagattttgaattgccaggtgctacgcgt
acagcgcgtagacaagaacttttaaagaagctacaagctctatctatatactgttcgcaa
atcggtgacacgagaccgatatcgttttgtcagtttagcccaaattcgaagattctcgct
acagcctcgtggtctggcttatgcaaattatggtcggtaccggactgtactctcttacga
acactacagggacacacctacaacgttagctgcatcgtttttcatccaaatgtctcgctt
tccgaagaggttttaggggatggcgcaggacagacgtgcgtattggcatcttgcgcttcg
gacggtacgcttgacgaatctttaggatctcgtagggtagtagatatttggaggaacctt
tttacgagctttttacgagttatcgttcttacaggtacggtcaaattatggtccggtggt
aaaggggaggaacctttagcagaagtcgaaggacacgaacctcatagagtttcgaggata
gccttccatccatccgggagatttcttggaacctgttgttacgatgcctcctggcggtta
tgggatttggaacaacaggcagaagttttgcatcaagagggtcatgccagagccgtacac
tgcatgagctttcagtgggacggcagcgtaaatgctaccggaggacatgattctttcggt
agagtttgggatttacgaacgggtagatgcatcatgttcatggaagggcatttaaaatct
atcttgggcatcgatttttcaccgaatggttatcacatagcaacagcgagcgaggataat
acatgcaagatctgggatttacgaaaaaggtcttgcatatacacgatacctgctcatacg
aatttgttatcggacgtgaaatatcagagaggagaaggacagtatctggttacgtcctcg
tacgataacacggccaagatttggtctaataagacctggcaaccgttaaagaccttgcca
gggcacgacggtaaggttatgtccgtcgatgtatctcccgatcacaaattcatcgcgact
agctcgtacgacagaacgtttaaattatgggcacccgaaaatatctaa
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