Vespa crabro (European hornet): 124432060
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Entry
124432060 CDS
T09462
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
vcrb
Vespa crabro (European hornet)
Pathway
vcrb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124432060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcrb03019
]
124432060
03012 Translation factors [BR:
vcrb03012
]
124432060
Enzymes [BR:
vcrb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124432060
Messenger RNA biogenesis [BR:
vcrb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
124432060
Translation factors [BR:
vcrb03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
124432060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_N
HA2_C
nSTAND3
AAA_22
ResIII
ATPase
AAA_14
AAA_19
PhoH
ABC_tran
NACHT
NB-ARC
NPHP3_N
Rad17
AAA_7
ATPase_2
AAA_16
TsaE
Sigma54_activat
T2SSE
Motif
Other DBs
NCBI-GeneID:
124432060
NCBI-ProteinID:
XP_046836533
LinkDB
All DBs
Position
23:1292113..1296925
Genome browser
AA seq
966 aa
AA seq
DB search
MSYQHTSKTSPRSSRFGRGNEQSQPNSSMSSSQNHGQSGGRGNGHPSWLRGKEIGLYYRD
LQKNRAKKRELRIIKLKQKVEQTMKLAVENSKGLYNKLCNDEEKQNSTSNDLENKYTHIH
DSQFKRKFLEILSGNIQHNIAKAMSAKSKLERDPISDKSLLDEYNGKLYSSDYKAMQAFR
KKLPAYEKKADILDLIKKNQVVVISGETGCGKTTQVAQFILDSELEERNGSITRIICTQP
RRISAISVAERVAAERAERLGKSVGFQIRLEKIPPRERGSILFCTTGMLLQFMQSDPALK
GFSHIILDEIHERSTESDFIITLLKQIIPVRPDLKVVLMSATLNSERFSDYYNDCPIIHI
PGFTYPVEEFYLEDVLLLTGFRLIESTFKEKELGYRKYQKKYKQQHEKNCHFLNIINPYI
KKLVIEKKYPKFVIDQLCHPDSENLSLELIEDLINHICTTKDPGAILVFLPGMMDIVKLN
RIMLNSGRYPNSRFIIYPLHSRMPTIDQRLIFKEPPTGIRKIIIATSIAETSITIEDVVY
VIDCGKTKLSRFDVNKNMETLEPEWVSMANAKQRRGRAGRVKKGYCYHLYSKAREMTFDD
YPLPEMLRTRLEEVILQIKILQLGEAKQFLASVMDPPNLKAIDLSLDLLRTLNALDNDEH
LTPLGYHLAQLPLDPRTGKMIIWAALFSCIDPVFAIAASLTFKDAFYCPLGKEEQAMKKK
LELSLWEFSDHIALAEALRRFEINYNFGFCHEYFLSFNTLKLLSEMKRQFAQHLYEMKFL
DNDNPIDEDANRNSNNIALIKAIVCAGLYPNIATIKYGSDSKHGVIAWTPEDGSVKLHPS
SVNNKMKDFPSPFLTYFTKQRSTAIYLHDTSCVTAPILLFAGSNSSIRRENGKYIITLNT
SQNFICEPRTAKVIQDLRQAINNLLEYKISHPGTVNWDTQEGQILNALIEFVSQTDEEMG
FGKLTW
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatcagcatacatcaaaaacatcaccaagatcgtctagatttggaagaggaaat
gaacaaagtcaaccaaattcatctatgtcgtcttcacaaaatcatgggcaatcgggcggt
agaggcaatggtcatccgtcttggttaagaggaaaagaaataggtttgtactatagggat
cttcaaaaaaacagggctaaaaaaagggaattacgtattattaaattaaagcaaaaagta
gaacaaacaatgaaactagcagttgaaaattccaaaggactgtacaataaattatgcaat
gacgaagaaaaacagaatagtacaagcaatgatttagaaaataaatatactcacattcat
gactcgcagtttaaaagaaagtttttagaaatcttatctggcaatatacaacataatatt
gccaaagctatgtcagctaaatccaaacttgaaagagatcctatttctgacaaaagtcta
ttagacgaatataatgggaaattgtatagcagtgattataaagctatgcaagcttttagg
aagaaattacctgcttatgaaaagaaagcagatattttagatttaataaaaaaaaatcaa
gttgtggtgatcagtggtgaaactggctgtggtaagacaacgcaagttgcacaatttatt
ttagatagcgaattagaagagagaaatggtagcattactagaatcatttgtacacaacca
agaaggatatcagcaatatctgttgctgaaagagtagctgctgaaagagcagagagactt
ggcaaatctgttggatttcaaataagattagaaaagataccacctagagaacgtggaagt
atattattttgcaccaccggcatgctattgcaatttatgcaatcggatccagcgctgaaa
ggattttcgcatataatattggacgaaattcacgaacgtagtacagaaagtgactttatt
attactttattgaaacaaataattcctgtgagaccagatttgaaagtggttttgatgagt
gctacgcttaattctgaaagattttccgattattataatgattgtccaataattcacata
ccaggattcacatatcccgtagaagaattttatttagaagatgtattattattaacagga
tttcgtttaattgaaagtacctttaaagaaaaagaacttggttatagaaaatatcaaaaa
aaatataagcaacagcatgaaaaaaattgtcattttctaaatattataaatccatatata
aagaaacttgtcatagaaaaaaaatatcctaagtttgttatagaccaattatgccatcca
gatagtgaaaatttatctttagaacttatagaagatttgatcaatcatatatgtacgacg
aaagatcctggagctattttagtatttttacctggaatgatggatatcgttaagttaaac
agaattatgttgaactctggacgatatccaaatagtagatttattatttatccacttcat
tctcgtatgccaacgatcgatcagaggcttatatttaaggaaccacctactggcatacgt
aaaataataattgcaacctccatcgctgaaacatctataacaatagaagatgtagtctac
gtaatagactgtggaaaaacaaagctttcaagattcgatgtgaataaaaatatggaaacg
ttagaacccgaatgggtatctatggctaatgctaaacaaagacgaggtcgtgcaggaaga
gtgaaaaaaggatattgttatcatctctacagtaaagcaagagaaatgacgttcgatgat
tatccattacccgaaatgttacgtacgcgattagaagaagtgatattacagataaaaatt
ttacaattaggggaagcaaagcaattccttgccagtgttatggatccacctaatttaaaa
gctattgatttatcgcttgatttattgagaacattaaatgctttagacaatgacgaacat
ttgacacctctgggttatcatttggcgcaacttcctcttgatcctaggactggtaaaatg
attatatgggccgcattattttcttgcatagatccagtatttgctatagcagccagtctc
acatttaaagatgctttttattgtcctttgggaaaagaagaacaagcaatgaaaaaaaaa
ttagaactcagtttgtgggaatttagcgatcatattgctctcgcggaagctcttaggaga
tttgaaatcaattataattttggtttctgtcatgaatattttttgtcctttaatactttg
aagcttctttccgaaatgaaacgtcagtttgctcaacacttgtacgaaatgaaattttta
gataatgataatccaatcgatgaggatgctaatagaaattctaataatatagccttgata
aaagctattgtttgtgcaggattatatccaaacattgccactataaagtatggatctgat
tcgaagcatggtgtaatagcttggacacctgaagatggttccgttaaattacatccatcc
agtgttaataataaaatgaaagattttccaagtcctttcttaacgtattttacaaaacaa
cgatctactgctatttatttacacgacacatcctgcgtcacagctccaatattattattc
gcaggatcaaatagttctattagaagagaaaatggaaagtacataatcacattaaatact
tcgcaaaatttcatttgcgaacctagaactgccaaagttatacaggatcttcgacaagca
ataaataatttattagaatataaaatatcgcatcctggtacagtaaattgggatactcaa
gagggacaaatacttaatgctcttattgaatttgtatcgcaaacggatgaagaaatggga
tttggtaaattgacatggtaa
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