Vespa crabro (European hornet): 124432642
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Entry
124432642 CDS
T09462
Name
(RefSeq) exosome complex component RRP43-like isoform X1
KO
K12586
exosome complex component RRP43
Organism
vcrb
Vespa crabro (European hornet)
Pathway
vcrb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124432642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcrb03019
]
124432642
Messenger RNA biogenesis [BR:
vcrb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124432642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
124432642
NCBI-ProteinID:
XP_046837625
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Position
1:complement(14669001..14671332)
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AA seq
290 aa
AA seq
DB search
MCIRYSLNGLCMKNNGFSIQAQDIRPDGRQFLSFRPISVNVSSITQADSSAVFKIGNTTV
ICGIKAELATPKVETPDCGFIVPNVELSALCSPKFHPGPPSEEAQVISKLIEHILTNSAA
VDLKKLCICEAKLVWVLYCDLLCINYDGAVVDACTGALATALKSLTLPRVTHDPNSGSTS
VQHEDRIPFTVKALPVSTTFAIFDRQLLIADPTDDEESLSLGKLTIVSDEEAICYVHKPG
GIPISQDLFIKSLAKSKGRADLVRTLINTAISTTEKKFDSLDKNTMLLNK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtgtattcgttatagtttgaacggattgtgcatgaaaaataatggattctcaatacaa
gcacaagatataagaccagatggaagacaatttctgtcttttcgtcctataagtgttaat
gtatcttcaataactcaagcagatagttcagctgtatttaaaattggaaatactacagta
atttgtggcatcaaagctgaattggcaacaccgaaagtagaaacacccgactgtggtttt
attgtgcctaatgttgagctttctgcattatgctctccaaaattccacccaggtccacca
agtgaagaagcacaagttatttctaaactaatagaacatattttaacaaattctgccgca
gtagatttgaaaaaattgtgtatttgtgaagctaaattagtgtgggtattatactgtgat
cttttatgcatcaattatgatggtgcagtagtagatgcctgcacaggtgcattagcaact
gctcttaaatccttaactttaccacgagtaactcatgatccaaatagtggaagtacttct
gtacagcatgaagataggattccatttacagttaaagcattacctgttagtacaactttc
gctatatttgataggcaacttttaatcgctgatccaacagatgatgaggaaagcttatca
ttaggaaaattaacaatagtttcagatgaagaagcaatatgttatgtacataaacctggt
ggcattccaatatcacaagatttatttataaaaagtttagcgaaatctaaaggaagagca
gatttagtgcgaacattaataaatactgctatatcaactacagagaaaaaatttgattca
ttagataagaatactatgctattaaataaataa
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