Vespa crabro (European hornet): 124432957
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Entry
124432957 CDS
T09462
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
vcrb
Vespa crabro (European hornet)
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vcrb04121
]
124432957
Enzymes [BR:
vcrb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124432957
Ubiquitin system [BR:
vcrb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
124432957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
124432957
NCBI-ProteinID:
XP_046838311
LinkDB
All DBs
Position
1:complement(6441310..6598517)
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AA seq
838 aa
AA seq
DB search
MDFVILKVNGQDVSNSSHEDAVRCFQSAQEPIIVEVLRRQPSSHQQQIVHTPSREHERSS
HGKNDGTTNEKETSEDEFGKENSCPLVSTAVQTDWAGLVEEEELLSVPLGTEEHTNDSFE
DFLAHDIDFEEVTLRKSGSAEKLGLTVCYSSGSGSEDADTEVYISEIVPESLAARDGRLR
EGDQILRVNGKDVANKEQTENLFAETKNAVTILVSRCLYQDDEYDDRRIYQQGSPPLSPE
NLPAYQNSMIEQLIRQQQHQQQQTEEHTKETEGNFSTLKAPPPIPSHMQQQQQQQQPQSP
QQQQQQQQQQQQQQQQQQQQYQHQLPTPQQQQTPSIFSTTSSSTCSSQNSQKSGKNATSP
AHHTEDRKQWMQDALKDCSKKIENLSLRGQQIVPSQTTIKLVEAYSSHVWSETEHIYETI
PESDSEPIYSSPYEHQHWTTQQLQMNHGSNSQQVQNHGNQTKLWHSSSKSNSSGEEKDSS
SAYNTGESCHSNPLTLELHQGERDHHKSTLVLCPPKSTSSQHLQQQQQQQQQQQQQQQQQ
QQQQQQQQQQKMGCNCPMPIMSMTSGKQGGRSQTTRKSSSHHKDRTDSSGSTLPADTMYT
NVANLQQTMLLQQQLFKQALNRKNLTAKETSGARKSKSHGNFQAPNLTQYQFVGSQQVCS
SAAWMPPEEKCEVQMEWKVKRRADGTRYIARRPVRNRLLRNRALKISEERAGHTTEDETM
SEMKVGRYWTKEERKRQLERARERKQRQQELMLQQQQQQQQLQLQHSNDLLICEYNEDKI
TKKPLNIVELSHKKMARKKTTLDDFTTVQEMLVHGNRVGASGPGTGGKLMGLLSVTTV
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgttatacttaaggtgaacggacaagatgtttctaactcgagtcacgaagat
gctgtacgttgctttcaatcggcacaagaacccatcatcgttgaggtccttcgaaggcag
ccctcatctcatcagcaacagatcgttcacacgccatcgagggaacacgagagatcgagt
cacggaaagaacgatggaacgacgaatgagaaggaaacgagcgaggacgaattcggaaaa
gaaaattcttgtcctttggtatcgactgctgttcaaactgattgggctggtttggtagag
gaagaagaattattatcggtaccgcttggtaccgaagaacacaccaacgacagtttcgag
gattttcttgcacatgacatagacttcgaggaagtaacgttacgtaaaagcggaagcgca
gaaaagctcggtctcacagtctgctatagttctggttccggtagcgaggacgccgacacc
gaggtttatatttcagaaatagttcctgaaagtttagcagcccgtgacggccggttacgg
gaaggtgaccaaatcttgcgagtgaatggaaaagatgtagctaacaaagaacaaacggaa
aatttattcgccgagacgaagaacgctgtgactatattagtcagtcgatgtctttaccag
gatgatgaatacgatgataggcgtatttatcaacagggctcaccgccattgtcaccggaa
aatttgccagcctatcagaacagtatgatcgagcaactaatacgacaacaacaacatcag
caacaacaaacggaagaacataccaaagaaacggaagggaatttttcgacgttgaaagct
ccacctcctattccatctcatatgcaacaacagcaacagcaacaacaaccacaatcaccg
cagcaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaa
tatcaacatcaattaccgactccgcaacaacaacaaacaccttcaatattttcaacgacc
tcatcttccacgtgttcttcgcaaaactcacaaaaatcaggtaagaatgcaacgtctccg
gctcaccacacggaagatagaaagcaatggatgcaggacgcgttaaaggattgttcgaag
aaaatcgaaaacttgtcattgcgaggtcagcaaatagtaccttctcaaacgacaataaaa
ctcgtcgaagcgtattccagtcacgtatggagcgaaaccgaacatatttatgaaacgata
cccgaatctgatagcgaacctatctattcctcgccttacgaacatcaacattggacgacg
cagcagttacagatgaatcatggatcaaactctcagcaggtacaaaatcatgggaatcaa
acaaagctctggcattcctcctcgaaaagtaacagttctggcgaggaaaaagatagttcg
agtgcttataatacaggagaatcttgtcacagtaatccgttaacattggaacttcatcag
ggtgagagagatcatcataagagcactctcgttctttgcccaccgaaaagtacaagtagc
caacatttacaacaacaacaacagcaacagcaacaacaacagcagcagcagcagcaacag
cagcaacaacaacaacaacaacagcaacagaaaatgggttgtaattgtcctatgccgatt
atgtcgatgacgtctggtaaacagggtggtaggagtcaaactacgagaaagagttcgtct
catcataaggatcgaacagattccagtgggagtacattacctgctgatactatgtatacg
aatgtagctaatctccaacaaactatgctcttgcaacaacaacttttcaaacaagcttta
aatagaaagaatctcacagcgaaggaaacaagtggtgctagaaagtccaagtctcatggt
aactttcaagcaccgaatctcacgcaatatcaattcgtcggtagccaacaagtttgttcc
tcagccgcttggatgccaccggaagaaaagtgcgaggtacagatggagtggaaagttaaa
cgaagagccgatggtaccaggtacatcgctagacgacccgttagaaatcgacttctcagg
aatagggctcttaaaatatcggaggaacgtgctggacatacgacggaggatgaaaccatg
tccgagatgaaggttggcagatattggacgaaagaggaacgcaaaaggcaattggaaaga
gcgcgagaacgtaagcaacgacagcaagaactgatgctgcaacaacaacaacagcagcag
caattacagttgcaacacagtaacgatcttttaatatgcgaatataacgaggataaaata
actaagaaaccattgaacatcgtcgaattgagtcacaaaaagatggcacgcaaaaagact
actttagacgactttactacggtacaggagatgttggttcatggaaacagagtcggtgca
agtggacccggtactggtggcaaattaatgggattattatcagttaccacggtgtaa
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