Vespa crabro (European hornet): 124432964
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Entry
124432964 CDS
T09462
Name
(RefSeq) transcription factor Sox-2-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
vcrb
Vespa crabro (European hornet)
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcrb03000
]
124432964
Transcription factors [BR:
vcrb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124432964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
DDHD
BAF1_ABF1
Motif
Other DBs
NCBI-GeneID:
124432964
NCBI-ProteinID:
XP_046838323
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All DBs
Position
2:21382072..21390544
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AA seq
528 aa
AA seq
DB search
MLTMETDLKGGSLHGQMPPHPHQGVSPMGHHTGVSPYGTLGSIVHSPALSGSPPSSSTLG
LGLQHHHQPQHHYASMQAAAAAAQQQQQQQQQQQQQQQQQQQQQQNMHTLAAQQSAAQQQ
HHPHQQPQQPQQQQSQNQHHQPPNNNNNTNKNNNIDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLLKKD
KFPLGGGVGGVGVGVGVGGILGVDQRQVGSTGGPQQGQISREVYQMPNGYMPNGYMMHDP
TAAAYQQHVAYGGHMGGAAAAAAAAGYPRYDMGHHMGGGSPPINSYMNGYGGYAGTTVPG
GSPSPYHQPQSGSQMSSHSPSGSSIKSEPTSPASAGIHTPTPTSGPGASSAASGPQQQQQ
AQQQQAAAAAAAAAVKREYMGQQTHQTHQSQGDLRQMISMYLPQGVDQGVVQHGAGVYSP
GPSPDPLAQHHSIPPLSHMAYRTSLSSFYCDRSTQERANVGLLHPLEI
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgctcacgatggagacggacctaaaaggcggtagcctgcatggtcagatgccaccgcat
ccgcaccaaggtgtatcgccgatgggtcaccataccggcgtgtcgccttacggaacacta
ggttccatagttcatagtccagccctatctggaagtccacctagcagtagtaccctagga
ttaggtctacagcatcatcatcaaccgcagcatcattacgcttcgatgcaggcggcagct
gctgcagcccaacagcagcagcagcagcaacaacaacagcaacaacaacaacagcagcag
cagcagcaacaacaaaacatgcatacccttgcggctcagcaaagtgccgcacaacagcaa
catcatccccatcagcaaccgcaacaaccacagcagcaacaatcccaaaatcaacatcat
cagccaccaaataataacaataatacgaataagaacaataacatagacagagtaaaaagg
ccaatgaacgcttttatggtctggtcccgtggtcagcggcgtaagatggctcaagagaat
cccaagatgcacaattctgagatttctaaacgcttaggagccgaatggaagttacttagc
gaaacggaaaaacgtccgtttattgacgaagcaaagcgattgcgtgcggtgcacatgaaa
gagcacccggattacaagtatcgtccaagaagaaaaacgaaaactcttttgaaaaaagac
aagttcccgctcggcggcggtgtcggaggagttggagttggcgttggtgtcggtggcata
ttaggggtagatcaaagacaagtcggtagtacgggtgggccccagcaaggacaaatatcc
cgagaggtctatcagatgcctaacggatatatgccgaatggttatatgatgcacgatccg
acggccgctgcgtatcagcagcacgttgcctatggtggtcacatgggtggagcggcggca
gccgcggccgctgctggatatccaagatatgatatgggacatcatatgggtggtggcagt
ccaccaataaacagttatatgaatggatatggtggttacgctggaaccactgtacccggc
ggttcaccttcgccctatcatcagcctcaatctggatcccaaatgtccagccacagtcct
agcggcagcagtataaaatctgagccaacgagtcctgcgagtgcgggtatacatactccc
acacctaccagcggaccgggcgcctcgagcgcagcgtctggtccgcaacagcagcaacag
gcgcaacaacaacaagctgctgctgctgccgctgccgccgccgttaaacgtgaatatatg
ggccaacaaacccatcaaactcatcaatctcagggagatcttagacagatgatatccatg
tatttgccgcaaggcgtcgaccaaggggtcgtccaacatggtgctggtgtctattctcct
ggtccatcaccggatcctttggcgcaacatcactcgataccacccctcagtcatatggct
tatcgaacgagcttatcgtcgttttattgtgaccgatcgacgcaagagagagctaacgtt
ggactgcttcatccactagaaatttaa
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