Vibrio cholerae O1 El Tor MS6: MS6_0058
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Entry
MS6_0058 CDS
T03666
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vcs
Vibrio cholerae O1 El Tor MS6
Pathway
vcs03420
Nucleotide excision repair
vcs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MS6_0058
03430 Mismatch repair
MS6_0058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcs03400
]
MS6_0058
Enzymes [BR:
vcs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MS6_0058
DNA repair and recombination proteins [BR:
vcs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MS6_0058
MMR (mismatch excision repair)
Other MMR factors
MS6_0058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
AAA_11
Speriolin_C
Motif
Other DBs
NCBI-ProteinID:
BAP01713
LinkDB
All DBs
Position
1:72933..75104
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AA seq
723 aa
AA seq
DB search
MIDPSLLLDGLNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLMSVEEASPFSVMA
VTFTNKAAAEMRGRIEELMHGTASGMWCGTFHGICHRILRAHYLDAKLLEDFQIIDSDDQ
QRLLKRLIKAHNLDDKQWPARQVAWWINNQKDEGLRPAHINAFDPVTQTYLKLYTAYQEA
CDRAGLVDFAEILLRTLELLRGNQHIREHYQARFKHILVDEFQDTNAIQYAWLRMMAGAQ
SNVMIVGDDDQSIYGWRGARVENIEKFTREFPSVNTIRLEQNYRSTKTILEASNTLIANN
SERMGKQLWTEGLVGEPISVYSAYNELDEARFVVSKIKGWQEQGGTLTDCAILYRNNAQS
RVLEEALLQASLAYRIYGGMRFFERQEIKDALSYLRLINNRNDDTAFERVINTPPRGLGD
KTLETIRFAARDRGCTLWDASVGLLNDQVLTGRAASALSRFVELINALEEEGIDMPLHVL
TDHAVKTSGLLEMYQQEKGEKSKARIENLEELVTATRQFEKPEEAQDMTMLTAFLTHAAL
EAGEGQADEHDDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLCY
VGMTRAMQKLYITYAEMRRLYGQDKYHKPSRFIRELPEGCLDEVRMKAQVSRPTSTGRFS
QTVVKESFNETGFNLGSRVRHPKFGEGTIINFEGSGPQSRVQVAFNGEGIKWLVTAYARL
EKV
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatccctctctattgctcgacggtctcaacgataaacaacgcgaagcggtggca
gcgccactggaaaacttactgattttggccggtgctggcagtggtaaaacccgcgtgctg
gtgcaccgaattgcgtggctgatgtcggtggaagaagcctcaccgttttcggtgatggcg
gtgacctttaccaacaaagccgcagccgaaatgcgtggccgaattgaagagctgatgcat
ggcaccgcctctggcatgtggtgtgggactttccacggtatttgccaccgtatcttgcgc
gctcactatctggacgctaagttgctggaagatttccagattatcgacagtgacgatcag
cagcgtctgctcaaacgcctcatcaaagcgcacaatctggatgataaacagtggccggca
cgccaagtcgcgtggtggatcaacaatcaaaaagatgaagggttgcgcccggcgcacatc
aacgcctttgatccggttactcaaacctatctcaagctgtacaccgcttaccaagaagcg
tgcgatcgcgccggcttggtcgatttcgccgaaattctgctgcgcaccctagagcttctg
cgtggtaatcagcacattcgcgagcattatcaggcgcgctttaagcacattttggttgat
gaattccaagacaccaacgcgattcaatacgcgtggctgcgtatgatggcgggcgctcag
tcgaatgtgatgattgtcggtgacgatgaccaatcgatttacggctggcgtggcgcgcga
gtggaaaacatcgagaaatttacccgcgaattcccgagcgtgaataccattcgactggag
caaaactaccgctccaccaaaaccattttggaagcctcaaacacactgatcgccaataac
agcgagcggatgggcaagcagttgtggaccgaaggtttggtcggtgagccaatttcagtg
tactcggcgtataacgagctcgatgaagcgcgctttgtggtcagcaaaatcaaaggctgg
caggagcaaggcggcacactgaccgattgtgcgatcttgtatcgtaacaacgcccagtca
cgggtactggaagaggcgttattgcaagcgagtttggcctaccgcatttatggcgggatg
cgctttttcgaacgccaagagatcaaagatgcactgagttatctgcgtttgattaataac
cgcaatgacgacactgcgtttgagcgggtgattaatacgccgccgcgcggtttgggtgat
aaaaccctagagaccattcgctttgccgcgcgcgatcgtggctgcaccttgtgggatgcc
agtgtcggtctgctcaatgaccaagtgctcactgggcgtgctgcgagcgcgctgagccgc
tttgttgaactgattaacgccttggaagaggaaggcatcgacatgccgctgcatgtgctc
acggaccacgcggtaaaaacctctggtctgctggagatgtatcagcaagaaaaaggcgaa
aaatccaaagcgcggattgaaaacttggaagagttggtcacggcgacgcgccagtttgaa
aagccagaagaagcgcaggatatgaccatgctgaccgcgtttttgacccatgcggcgctt
gaagcgggtgaaggccaagctgatgagcatgatgatgcggtacagctgatgaccttgcat
agtgccaaaggattagagtttccgctggtgtttatggtcggtgtggaagagggcatgttc
ccgagccaaatgtctgccgaagaggcggggcgcctcgaagaggagcgtcgcctgtgttac
gtcggtatgacccgcgcgatgcaaaaactctacatcacctacgcggaaatgcgccgcttg
tacgggcaagataagtatcacaaaccctcacgctttattcgtgaactgccagaaggctgt
ttggatgaagtgcgcatgaaggcgcaagtcagccgcccaaccagcacagggcgctttagc
caaaccgtagtaaaagaaagctttaacgaaaccggttttaatttgggctcacgagtccgt
cacccgaaatttggtgaaggcaccatcattaactttgaaggcagtggcccgcaaagccga
gtgcaagtggcgtttaatggcgaaggcattaagtggttagtgacggcttacgcgagatta
gagaaggtgtag
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