| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase beta subunit
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| KO |
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| Organism |
vcs Vibrio cholerae O1 El Tor MS6
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:vcs00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MS6_0185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:vcs03021]
MS6_0185
03400 DNA repair and recombination proteins [BR:vcs03400]
MS6_0185
Enzymes [BR:vcs01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MS6_0185
Transcription machinery [BR:vcs03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MS6_0185
DNA repair and recombination proteins [BR:vcs03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MS6_0185
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1:217829..221854
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| AA seq |
1341 aa
MVYSYTEKKRIRKDFGTRPQVLDIPYLLSIQLDSFEKFIEQDPEGQYGLEAAFRSVFPIQ
SYNGNSELQYVSYRLGEPVFDVKECQIRGVTYSKPLRVKLRLVIFDKDAPAGTVKDIKEQ
EVYMGEIPLMTENGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLYVRIDRRRKLPASIILRALGKTSAEILDIFFEKVNFEVKDQTLMME
LVPERLRGETATFDIEADGKVYVEKGRRVTARHIRQLEKDGVNFIEVPVEYIVGKVSAKD
YVNEATGELIITANQEISLEALANLSQAGYKKLEVLFTNDLDHGPFMSETLRVDSTTDRI
SALVEIYRMMRPGEPPTKEAAESLFESLFFSAERYDLSTVGRMKFNSSIGREDAEEQGTL
DEVDIIEVMKKLISIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDNVMPQDLINAKPISAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGGLTR
ERAGFEVRDVHVTHYGRLCPIETPEGPNIGLINSLSAFARCNEYGFLETPYRRVVNGVVT
DEVDYLSAIEEGQFVIAQANAKLTEEGGFADELVTARQKGESGLHPREHVDYMDVATNQV
VSIAASLIPFLEHDDANRALMGANMQRQAVPTLRSEKPLVGTGIERNVAVDSGVTAVAKR
GGVIQSVDASRIVVKVNEEELIPGEAGIDIYNLTKYTRSNQNTCINQRPCVMPGEPVARG
DVLADGPSTDLGELALGQNMRIAFMPWNGYNFEDSILVSERVVQDDRFTTIHIQELSCVA
RDTKLGAEEITADIPNVGEAALSKLDESGIVYIGAEVKGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDTSLRVPNSVAGTVIDVQVFTRDGVEKDKRALEIEQMQLKEAKKDL
TEEFQILEGGLLARVRSVLLAGGYTEAKLGSIERKKWLEQTLENEELQNQLEQLAEQYDE
LKADFDKKFEAKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKIN
PVEDMPYDENGQPVDIVLNPLGVPSRMNIGQILEVHLGLAAKGIGDKINQMIKEQQELAK
LREFLQKVYDLGDTRQRVDISELSDEDVRTLAHNLRAGLPVATPVFDGAPESSIKAMLEL
ADLPASGQLTLFDGRTGDAFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGG
KAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHAMEPGMPE
SFNVLLKEIRSLGINIELEDE |
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| NT seq |
4026 nt +upstreamnt +downstreamnt
atggtttactcttataccgagaaaaagcgcatccgtaaggactttggtactcgtccacaa
gtgttggacattccatacctgctatcgatccagctcgattcgttcgaaaagttcatcgaa
caggatcctgaaggacaatacggtcttgaagccgcttttcgttctgtatttccaattcag
agctataacggcaattcagagctgcaatacgttagctaccgtcttggtgagccagttttt
gacgttaaagaatgtcaaatccgtggtgtaacttattcaaaaccgctacgcgtgaaatta
cgcttagtgatctttgataaagacgcgccagcaggtactgtcaaagatattaaagaacaa
gaagtctacatgggcgaaattccgctcatgacagaaaatggtaccttcgtaatcaatggt
actgagagggttatcgtatcccagctgcaccgaagcccaggcgtgttcttcgacagcgat
aagggtaagacccactcttcaggtaaagttctgtataacgcacgtatcattccgtaccgt
ggttcatggctcgattttgagttcgatccaaaagacaacctgtacgtacgtattgaccgt
cgtcgtaagctgcctgcatcgatcatcctgcgtgcactaggtaaaactagcgccgagatc
ctggacatcttcttcgaaaaagtgaatttcgaagtgaaagatcaaactctaatgatggag
ttggttccagagcgtctgcgtggtgaaactgcgaccttcgatatcgaagcggatggcaag
gtttacgtagagaaaggccgtcgtgtgactgcacgtcacatccgtcaacttgaaaaagat
ggcgtgaactttattgaagttccggttgagtacatcgtaggtaaagtatctgcgaaagat
tacgtgaatgaagcgactggcgaactgatcattaccgcgaaccaggaaatcagcctggaa
gcgctagcgaacctgtctcaagccggttacaaaaagctagaagttctatttaccaatgat
ctggaccacggtccgttcatgtcagaaaccctgcgtgttgatagcacgacagatcgcatc
tctgcactggtagaaatctaccgcatgatgcgccctggcgagccaccaacgaaagaagcc
gcggaatcgctgtttgaaagtctattcttctctgcagagcgttacgatctgtcgactgtt
ggccgtatgaagttcaacagctcaatcggtcgtgaagatgcggaagagcaaggcacgctg
gacgaagttgacatcatcgaagtgatgaaaaagctgatctcgattcgtaacggtaaaggc
gaagtggacgatatcgaccaccttggcaaccgtcgtatccgtagtgtcggcgaaatggca
gagaaccaattccgtgttggtctggtacgtgttgaacgcgcagtgaaagaacgcctaagc
ttgggcgatctggacaacgtgatgccacaagacctgatcaacgcgaaaccaatttctgct
gctgtaaaagaattctttggttcttctcagctgtctcagtttatggatcagaacaacccg
ttgtcagaagtgacgcataagcgtcgtatttctgcattgggccctggcggtctgactcgt
gagcgtgctggcttcgaagtacgtgacgtacacgtaacgcactacggtcgtctatgtcct
atcgaaacacctgaaggtccaaacatcggtttgatcaactcgctgtctgcgtttgcacgc
tgcaacgagtacggtttcctagaaaccccttaccgtcgcgtagtcaacggtgttgtgact
gacgaagtggattacctctctgcgattgaagaaggtcaattcgttatcgctcaggcgaac
gctaagctgacagaagaaggcggttttgctgatgaactggttaccgcacgtcaaaaaggc
gagtcaggtcttcacccacgtgaacacgttgactacatggacgttgcgacaaaccaagtt
gtatcgatcgcggcatccttgatcccgttcctagaacacgacgatgcgaaccgtgctttg
atgggtgcgaacatgcaacgtcaggcggttccaactctgcgttcagagaaaccactggtt
ggtacgggtatcgagcgtaacgtagcggttgactctggtgtaacagcggtggcgaaacgt
ggcggtgttatccagtcagttgatgcttctcgtatcgtagtcaaagtgaacgaagaagag
ttgatccctggcgaagcgggtatcgacatctacaacctgactaagtacacccgttcgaac
cagaatacttgtatcaaccagcgtccatgtgtgatgccgggtgaacctgtagctcgtggc
gatgtactggcagacggtccttcaactgaccttggcgaactggctcttggccaaaacatg
cgtatcgcattcatgccttggaacggttacaacttcgaagactcgatcttagtgtctgag
cgcgtagttcaagacgaccgctttactactatccacatccaagagctttcttgtgtggcg
cgtgatactaagctgggcgcagaagagatcacggctgacatccctaacgtgggtgaagcg
gctctgtctaagcttgacgaatctggcatcgtgtacatcggtgcagaagtgaaaggcggc
gacattctggttggtaaagtgacaccaaaaggtgaaactcaactgactccagaagagaaa
ctgctgcgtgcgatcttcggtgagaaagcctcagacgtgaaagatacgtctctgcgtgta
ccgaactcagtagcaggtacggttatcgacgtacaagtctttactcgcgatggcgtagaa
aaagacaagcgtgcgcttgaaatcgaacagatgcagctgaaagaagcgaagaaagacctg
actgaagagttccaaattctggaaggcggtcttctggcgcgtgttcgttctgtactgctg
gcgggtggttacactgaagcgaaactgggttcaatcgaacgtaagaaatggttagagcag
acgcttgaaaatgaagagctgcaaaaccagctagagcaactggcagaacagtacgacgaa
ctgaaagcagacttcgataagaagtttgaagcgaagcgtcgtaagatcacccaaggtgat
gatctggctcctggcgtactgaagattgttaaggtttacctagcagtgaaacgtcgcatc
cagccgggtgataagatggcgggtcgtcacggtaacaagggtgttatctctaagatcaac
cctgttgaagacatgccatacgatgaaaacggtcagccggttgacatcgtactgaaccca
ctgggcgtaccatcacgtatgaacatcggtcagatcctagaagttcacttgggtctggcg
gcgaaaggtatcggtgacaagatcaaccaaatgatcaaggaacaacaagagctggcgaag
ctgcgtgagttcctgcagaaggtttatgatctaggcgatactcgtcaacgcgttgatatc
tcagaactcagtgatgaagatgttcgtacactggcgcataacctgcgtgctggtctaccg
gtcgcaacgccagtcttcgatggtgctcctgaatcgtctatcaaagctatgttggaactg
gcggatctgccagcttcaggtcagttgactctgttcgatggccgcacgggtgacgcattt
gagcgccctgttaccgtgggttacatgtacatgctgaaactgaaccacttggttgacgac
aagatgcacgctcgttctacaggctcttacagtctggttactcagcaacctctgggtggt
aaagctcagttcggtggtcagcgcttcggtgagatggaagtgtgggcactggaagcatac
ggtgctgcgtataccctgcaagagatgttgaccgttaaatcggacgacgtgaacggccgt
actaagatgtataagaacatcgtagatggcaatcacgcgatggaacctggtatgccagaa
tcgttcaacgtactgttgaaagagattcgctcgctgggtatcaacatcgagctagaagac
gaataa |
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