Vibrio cholerae O1 El Tor MS6: MS6_0248 Help Entry MS6_0248          CDS       T03666                                  Name (GenBank) excinuclease ABC subunit A   KO K03701   excinuclease ABC subunit A Organism vcs  Vibrio cholerae O1 El Tor MS6 Pathway vcs03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:vcs00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     MS6_0248  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:vcs03400]     MS6_0248 DNA repair and recombination proteins [BR:vcs03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      MS6_0248   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       MS6_0248 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 DnaJ_CXXCXGXG AAA_25 RsgA_GTPase AAA_23 NACHT nSTAND3 Viral_helicase1 ScfRs Motif Other DBs NCBI-ProteinID:  BAP01903 LinkDB All DBs Position 1:complement(294757..297579) Genome browser AA seq 940 aa AA seqDB search MDKIEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRC PEHQVPLKAQTISQMVDKVLELPEGSKMMLLATIVKERKGEHVKTLENLAAQGFIRARID GETCDLTDPPKLELHKKHTIEVIVDRFKVRSDLQQRLAESFETALELSGGIVVVAPMEGD GEEQIFSANFACPHCGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQDANLS LAQGAIRGWDQKNFYYFQMLTALAEHYDFDVHTPFNKLSKKIQEIILHGSGRTEIEFKYI NDRGDIRLKKHPFEGILHNLERRYRDTESNSVREELAKYISNKPCSSCDGTRLKIEARNV FINDTALPTIVELSIADALTFFQELKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLQTLTHLRNLGNTV LVVEHDEDAIRMADHVIDIGPGAGVHGGMVVAEGNVEEIIANPNSLTGQYLSGVKKIAVP EQRTPKDAKKTVELKGAVGNNLKNVDLSIPVGLFTCVTGVSGSGKSTLINDTFFKIAHTA LNGATTATPAPYRSIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQES RSRGYQPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRYK GKTIDEVLDMTVEDAREFFDPVPVIARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKLA RELSKRDTGKTLYILDEPTTGLHFHDIQQLLSVLHRLRDHGNTVVVIEHNLDVIKTADWI IDLGPEGGQGGGLIIAEGTPEDVAQIEASHTARFLKPLLN NT seq 2823 nt NT seq  +upstreamnt  +downstreamnt atggacaaaatcgaagtacgcggcgctcgtacccataacctcaaaaatatcaatctgacc attcctcgtgacaaattgattgtcatcaccggcctctctggttcaggtaaatcctcactg gcttttgatacgctgtacgcagaaggtcaacggcgttatgtcgaatcactctcggcttat gcgcgccaattcctttctctgatggaaaagccggatgtagaccatattgaggggctttca cccgcgatttcgattgagcagaagtccacttcccataacccacgctctactgtgggtacg attacggaagtgtatgactatttacgtctactctacgctcgggttggtgagccacgctgc cccgaacaccaagtgccactgaaagcgcaaaccatcagtcagatggtagacaaagtattg gaattgccagaaggcagcaaaatgatgctgctggcaaccatagtcaaagagcgcaaaggc gaacacgttaaaacattggaaaaccttgctgcgcagggctttattcgtgcgcgtatcgat ggtgaaacctgcgatctgaccgatccaccgaaactcgaactgcacaaaaagcataccatt gaagtaattgtcgaccgtttcaaagtgcgcagtgatctgcagcaacgcttagccgaatcc tttgaaaccgccttggaactttccggcggtatcgtcgttgtcgccccgatggaaggcgat ggcgaagagcagattttctcggctaactttgcttgtccacattgcggttacagcatgcgc gaacttgaaccacgcctgttctccttcaacaacccagccggtgcttgtccaacctgtgat ggtttaggagtacagcagtatttcgatccagatcgagtgattcaagatgccaatttaagt ttggcacaaggtgcgatccgcggttgggatcaaaagaacttttattatttccagatgctg actgcactggccgagcactacgattttgatgtacacacgcccttcaataagctgagcaaa aagattcaggaaatcattctgcacggctctggtcgcaccgaaattgaatttaagtacatc aatgatcggggtgatattcgccttaaaaaacatccttttgaaggaattttgcataatttg gagcgccgctatcgcgataccgaatccaactcggtacgtgaggagctggcaaaatacatc tccaacaagccttgcagcagctgtgatggtacgcgcttaaaaatcgaagcacgcaatgtg tttattaatgatactgcgctgccaacgattgtagaactgagcattgctgatgcgctaacg ttcttccaagagctcaaactggaaggccaacgtgcacaaatcgctgaaaaagtgatgaaa gagattaatgaccggctgcaatttttggtcaatgtcgggctcaattacttaaatctctcg cgcagcgccgagacgctttccggtggcgaagctcagcgtattcgtctagccagtcagatt ggtgcgggtttagtcggtgtgatgtatgtccttgatgaaccctcgattggcctccaccaa cgcgacaacgaacgcttgctgcaaaccctcacccacttacgcaatctagggaataccgtg ttagtggttgagcatgatgaagatgcgattcgcatggcagatcatgtgattgatattggc ccaggtgctggcgtacacggcggcatggtggttgccgaaggcaatgtggaggaaatcatc gccaatccaaactcactcacaggtcaatatctcagtggcgtgaaaaaaatcgcggtacca gagcagcgcacaccaaaagatgcgaagaaaacggtagagcttaaaggcgcagtcggtaat aacttaaaaaatgttgacctgtctattcctgttggcctgtttacttgtgtgacgggcgtt tcaggttcgggaaaatccactctgatcaacgataccttctttaagattgcccatacagca ctcaatggcgcgacgacggcgacacctgcgccttatcgctccattcaaggtctagaacac tttgataaagtgatcgatatcgatcagagcccaattggtcgcactcctcgctccaaccct gccacttacaccggaatcttcactccaatccgtgaattatttgcaggaacacaagagtct cgctcgcgtggttatcagccgggacgctttagttttaacgtccgcggagggcgctgtgaa gcgtgccaaggcgatggcgtgatcaaagttgaaatgcacttcttacccgatgtgtatgtg ccttgtgatgtgtgtaaaggtaaacgctataaccgagaaacactggaagtgcgctacaaa ggcaagacgattgatgaagttttggacatgaccgttgaagacgcacgcgagttttttgac cccgtacctgtgatagcacgtaagctgcaaaccttgatggatgttggattgtcctacatt cgtcttgggcaatcagccaccaccttatcaggaggtgaagcgcagcgggtaaaattagcg cgtgaactctccaaacgagatacgggcaaaaccctgtatattttggatgaaccaaccacg ggcctacacttccacgatattcagcaactattgagcgttctgcaccgcttgcgtgaccat ggcaataccgtggtggtgattgagcataacttggatgtgatcaaaacggctgactggatc atcgatttaggccccgaaggcggccaaggcggcggactgattattgcagaaggaacacca gaagatgtggcgcagatcgaagcttcacataccgcacgtttcctcaagcctttgttgaat tag

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