Vibrio cholerae O1 El Tor MS6: MS6_0299
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Entry
MS6_0299 CDS
T03666
Name
(GenBank) LPS assembly outer membrane complex protein LptD
KO
K04744
LPS-assembly protein
Organism
vcs
Vibrio cholerae O1 El Tor MS6
Brite
KEGG Orthology (KO) [BR:
vcs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcs02000
]
MS6_0299
Transporters [BR:
vcs02000
]
Other transporters
Pores ion channels [TC:
1
]
MS6_0299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptD
LptD_N
LptC
OstA_2
FliC
Cthe_2159
Motif
Other DBs
NCBI-ProteinID:
BAP01954
LinkDB
All DBs
Position
1:complement(351984..354335)
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AA seq
783 aa
AA seq
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MSCFSRTFLAASISAALFAPQIQAEASVDDNRAQLPNGEQCLVNQPEPTNPGQQPINVEA
DKLEAINGQKATYSGNVVVVQGKKRIAADNVTLHQQENVVVAEGNVQFSDGEIKTHSTKA
TNHLNTDEMTLENTRYQFLCEPGRGEAVYVSKTGKAVYEIEDGSITSCPDGDNAWRMRAS
SIDVDQNEEIATFYNPRLEVQNVPVFYLPYLTVPIGDTRKTGFLYPTASYGSRNGYSFEV
PIYWNLAPQYDLETTFNYMQKRGTQLNSVFRYLTDFGAGQIKSEYLADDQLHTELGDRWA
FQYEHNGIFQQAWKFEIDYSKVSDINYFSDLDSGVGNREDGQLIQEGRATYRSDNWDSAL
LVRDFQLLTKDTTSTNLPYRLMPQLSYNYYAPETMKYLDLDLVSHVSRFETDARGKPSAT
RVHIEPGLKIPFSNTWGNWTTEARVLGTYYQQDLDKTTDAKLEESVTRVIPEIRSVAGIV
LERDTVLLDDYTQTLEPKIQYLYVPEKYQDNIGLYDSTLLQTDYYGLFRSRKYSGVDRIE
SANQVSYGASTRFFDSNYKERLNIAFGQIFYLDSKLNPSNKNPDSTSDKTSYSAWAVEMD
FNFADYLFYHGGIQYDIDSQAVQLGNSTLEYRVASGYIQANYRYVAKDYIRNTVGDSITN
IDDITRDGISQAGILAGYQLSRKWSASGQYYYDLTTDEALEWLANLTYTSDCWYVGFTYS
NQLKSWNGNFVTDPYATPIYENNFSFNIGIIGFGTSIGAGSSMTGVDSAGNSLGYGRPFF
LNN
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgtcatgcttttcccgcacgtttttagccgcttcgattagcgctgcactctttgcacct
cagatacaagcagaagcgagtgtggatgacaatcgcgctcaattacctaatggtgagcag
tgtttagtcaaccagcctgagcctactaatcccggccaacagcctatcaatgtcgaagcg
gataagctagaggcaatcaatgggcagaaggcgacctattcggggaatgtcgttgtcgtg
caaggtaagaaacgcattgctgcggataacgtgactttgcatcaacaagagaatgtggtt
gtcgctgaaggtaatgttcagttcagtgatggtgagataaaaacacactccaccaaagcg
accaaccatctcaataccgatgaaatgacgctggaaaatactcgctaccagtttttgtgt
gaaccgggccgtggtgaagcggtgtatgtttcgaaaacgggcaaagccgtgtatgaaatt
gaagatggctccatcacctcatgtcctgatggtgataatgcatggcggatgcgtgcttcc
agcattgatgtggatcagaatgaagagattgcgaccttctacaatccgcgtcttgaagtg
caaaacgtacctgtgttctatctcccctatttgactgtgccaatcggtgatacgcgtaaa
actggttttctatacccgacggcctcttacggctcacgaaatggctattcgtttgaagtg
ccaatttattggaacttggcaccccaatatgacttagaaaccacctttaactatatgcaa
aagcgcggaacacaactgaatagtgtgttccgttatctgaccgattttggtgcgggtcaa
atcaaatctgaatatcttgccgacgatcagctgcacactgaattaggcgatcgctgggca
ttccaatatgagcataacggcattttccaacaagcttggaaatttgaaatcgactactcc
aaagtcagcgatatcaactatttctctgacttagattcgggagtcggtaatcgtgaagat
ggacaactcatccaagaagggcgtgccacttaccgtagcgacaactgggattctgcgctg
ttggtgcgggatttccaactactgaccaaggataccactagcacgaacttgccttatcgg
ttaatgccccagctcagctacaactactatgctccagagacgatgaagtatctggatctt
gaccttgtcagccatgtctcgcgctttgaaaccgatgcaagaggcaaaccctctgcaact
cgagtacatattgaacctgggctcaaaattccgttcagcaacacttggggcaactggaca
accgaagcacgtgtcttgggcacctactatcaacaagatcttgataagaccacagatgcc
aaactggaagagagtgtgacacgcgttatccctgagattcgcagtgtagcgggcattgtg
cttgaacgagatacggtactgcttgatgactacactcaaacccttgaacccaaaattcaa
tatctctacgtgccagaaaaatatcaggacaatattggtctgtatgattccactttgctg
caaaccgactactacgggctattccgcagtcgcaaatacagcggcgtagaccgaattgag
tccgccaaccaagtcagctacggtgcatcgactcgtttctttgatagcaactataaagag
cgcctcaatatcgcgtttggtcagattttctatctggacagcaagctcaatccgtccaat
aaaaatccagacagcacatcggataaaaccagctattccgcttgggccgttgagatggac
tttaactttgctgactatctgttctatcacggcggcattcaatacgacatcgatagccaa
gccgttcaacttggcaacagtacattagaatatcgagtcgccagcggttatattcaagct
aactaccgctatgttgctaaggattatattcgcaataccgtcggtgacagcattaccaat
attgatgacattacccgagacggtatttcacaagcgggcattttggcgggttaccagttg
agtcgtaaatggtcggctagcggtcaatattactatgacctgaccacagacgaggcgtta
gagtggctggctaacctgacttacacttcagattgttggtatgtgggctttacttacagt
aaccaattaaaaagctggaatggcaactttgttacggatccttacgcgactccgatttat
gagaataacttcagctttaacatcgggattattggttttggcaccagcattggcgcaggc
tcaagcatgacaggtgtcgatagcgcaggtaactcactcggttatggtcgcccattcttc
ctgaataactaa
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