Vibrio cholerae O1 El Tor MS6: MS6_0523
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Entry
MS6_0523 CDS
T03666
Name
(GenBank) predicted polyamine sensor NspS, involved in biofilm formation
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
vcs
Vibrio cholerae O1 El Tor MS6
Pathway
vcs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
MS6_0523
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcs02000
]
MS6_0523
Transporters [BR:
vcs02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
MS6_0523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
BAP02178
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All DBs
Position
1:complement(603263..604303)
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AA seq
346 aa
AA seq
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MIKRFLSLMVLNTVCYQASALELNVYLWEDTIAPSVVEAWHKKTGVSVNLFHFDNDDERS
LLMLKSVQLPFDIMVLDNVSAFIFSRQNVFEDLTALPNRANNDPMWLQACGTHAVPYFWG
SVGIAYRKSLFDKPPTQWSEVVDIAPAHRGRVGMLKDSVETLLPALYMLNASPITDSIDT
LRQAYRLLDAANPHILTYEYVLSYVRSHPQTDNLHMAVSYSGDHYSLNRFFNTQDWDFSV
PEGRPYLWVDCMAVNSVSPNTVQAKAFLDFLMKPDIAAINAEYIRAASPNYKARALLPVE
HREDLSIYLPEQRLAEGIIDSELSAKNLSLRAKIISSVTYQYEAKP
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacgctttctgtcgctgatggtattgaatactgtctgttatcaagccagcgct
ttggaactgaatgtctacctttgggaagatacgattgcaccaagcgtagttgaggcatgg
cataaaaaaaccggcgtctccgttaatctcttccatttcgataatgatgatgaacgcagt
ttattaatgctcaaaagcgtacaactgccctttgacatcatggttttggataacgtctcc
gcgttcattttctcaaggcaaaatgtttttgaagatctgaccgcccttcccaatcgtgcg
aataatgaccctatgtggctacaagcttgtggcacccatgcggtaccttatttctggggc
tcagtcggcattgcctatcgcaaaagcttgtttgataaacctccaacgcagtggagtgag
gtcgtcgatatcgctccggcgcatcgtggacgagtgggtatgcttaaagacagtgtcgaa
acactactgcctgcactatacatgctcaacgcctctcccattaccgattctatcgacaca
ctaaggcaagcgtatcgtctcttagacgccgccaatccccatatcctgacttatgagtat
gtattgagctatgtacgcagccacccacaaaccgacaatctacatatggcggtctcttac
agtggcgatcactattcactgaaccgcttcttcaatactcaagactgggactttagcgtt
ccagaaggccgcccttatttgtgggttgattgtatggccgtaaatagcgtttctcccaac
acagtgcaagccaaagcttttttggatttcttgatgaaacctgacattgccgcaatcaat
gccgaatatattcgagctgcaagcccgaactacaaagcacgcgctttgctccctgtagag
caccgagaagatctctcgatttatctcccagagcagcgattggcggaggggataatcgac
agcgaactctcggcgaaaaacctcagtctgcgtgccaaaatcatcagcagtgtgacttac
caatatgaagctaaaccatag
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