Vibrio cholerae O1 El Tor MS6: MS6_0578
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Entry
MS6_0578 CDS
T03666
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
vcs
Vibrio cholerae O1 El Tor MS6
Pathway
vcs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MS6_0578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcs03400
]
MS6_0578
Enzymes [BR:
vcs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
MS6_0578
DNA repair and recombination proteins [BR:
vcs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
MS6_0578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF5867
Motif
Other DBs
NCBI-ProteinID:
BAP02233
LinkDB
All DBs
Position
1:complement(668129..669469)
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AA seq
446 aa
AA seq
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MSSSLANRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSAPVSGHWYLTLKDSQAQVK
CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM
QLAAEGLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE
EAAIQIAQAIGRANTRAECDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPIISAVGHE
IDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASTMRHYLAQQETQFARL
QHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSPIHLIRQ
QRFNLIQQEQRINQSIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQ
SAQVKPGDTLVTQLMDGEILSTVNSR
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
ttgtcttcttctctcgccaatcgaaatatctacaccgtttcccgtttaaattctgaagtt
cgtttattactggaaaatgaaatggggatcgtctggttggtgggtgaaatttccaacttc
tccgctcccgtctctggtcactggtatctcactttaaaagacagccaagcgcaggttaaa
tgcgctatgttcaaaggcaataaccgtctggtgaatttcaaaccgcaaaatggtcagcaa
gtattagttaaagctcgactttctctttacgaaccgcgcggtgactaccaaattattctt
gaaagcatgcaaccggaaggggatggccgtctgcagcagcagtttgaacaactgaagatg
cagctcgccgccgaaggtttgtttgctcagacacgtaaaaaaccattgccggaaaatcca
cgctgcgtggggattatcacctcacggactggcgcggctttgcacgatattttgcacgtg
cttaagcgccgtgacccgaatctgcctgtagtgatctaccccactctcgtacaaggtgaa
gaggcagctattcaaatcgcccaagcgattggtcgtgcgaatacacgcgccgagtgcgat
gtgttgatagtaggtcgtggtggtggctctttggaagatttgtggtgttttaaccatgaa
atcgtggcacgtactatcgctgcgagtgaaatcccaattatcagtgctgtaggccatgaa
atcgatgtgacgatcgctgactttgtcgccgatgtgcgtgcccctaccccatcagcagcg
gcggaattggtcagccgtgatcatcgccataaacagcaagcactccatcaatggcaagcc
aaactggctagcaccatgcgccattatttggcgcagcaagagacgcaatttgcccgttta
cagcacaagcttgataaacagcatcctcaagctcgtttagagcgccagcagcagcaactt
gatgagctcagcctgcgtcttgagcaaaagatgcagcaacgtctggcaactcagcagcaa
cgctgggatcgcttaagccataagatcgagctccattcgcccattcacttgatccgccag
cagcgttttaatctgatccagcaagagcagcgaataaatcagtcgatccaacgctatttg
atccaatcacgccatcaactcgctttgttgagtgaaaagttggatgcggtcagccctctt
gcaaccttagcccgtggctattcggtgacacgtaccacacaaggtgagttagtgcgccaa
agcgcgcaagtgaaaccgggtgacactttagtcacccagttaatggatggtgagattctc
tctactgtgaattcccgttaa
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