Vibrio cholerae O1 El Tor MS6: MS6_0839
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Entry
MS6_0839 CDS
T03666
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
vcs
Vibrio cholerae O1 El Tor MS6
Pathway
vcs00071
Fatty acid degradation
vcs00280
Valine, leucine and isoleucine degradation
vcs00310
Lysine degradation
vcs00362
Benzoate degradation
vcs00380
Tryptophan metabolism
vcs00410
beta-Alanine metabolism
vcs00640
Propanoate metabolism
vcs00650
Butanoate metabolism
vcs00907
Pinene, camphor and geraniol degradation
vcs00930
Caprolactam degradation
vcs01100
Metabolic pathways
vcs01110
Biosynthesis of secondary metabolites
vcs01120
Microbial metabolism in diverse environments
vcs01200
Carbon metabolism
vcs01212
Fatty acid metabolism
Module
vcs_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vcs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
MS6_0839
00650 Butanoate metabolism
MS6_0839
09103 Lipid metabolism
00071 Fatty acid degradation
MS6_0839
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
MS6_0839
00310 Lysine degradation
MS6_0839
00380 Tryptophan metabolism
MS6_0839
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
MS6_0839
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
MS6_0839
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
MS6_0839
00930 Caprolactam degradation
MS6_0839
Enzymes [BR:
vcs01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
MS6_0839
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
MS6_0839
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
MS6_0839
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
LEM
Motif
Other DBs
NCBI-ProteinID:
BAP02494
LinkDB
All DBs
Position
1:965540..967666
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AA seq
708 aa
AA seq
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MDNNNAFQLSFDEQHYAWLAIDVPGEKMNTLQAAFAEEMQAVFATLNEKRGQIKGLIIHS
LKPDNFIAGADVRMLEACQSVHEAQALASQGQQMFQQLADLPFPVVAAIHGPCLGGGLEL
ALACDYRVCTEDEVTRLGLPEVMLGLLPGSGGTQRLPRLIGLLPALDLILTGKQLRAKKA
KKLGVVDACVPHSVLLDVAKRLLEEKGHKKRAQVTLPIKEKLLANTGLGRKLIFDQAAKK
TQQKTRGNYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRESKALRSIFFATTEM
KKDLGADAKPAPVAAVGVLGGGLMGAGISHVTVAKAKTSVRIKDVANDGVLNALNYNYKL
FDKQRQRKILTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVFEDLKLKQQMVADIEANAK
PTTIFATNTSSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLVEVIPHATTSDETIATVVT
LARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMAGEPIEKLDAALLDFGFPVGPITL
LDEVGVDIGAKIMPILVKELGPRFQGPDVFDVLLKDNRKGRKSGKGFYTYKGSKKKEVDK
SVYKLLKLTPESKLNDKEIAMRCLLPMLNEAVRCLDEGIIRSARDGDMGAIFGIGFPPFL
GGPFRYMDTLGLTKVVEMMNQHTEKYGERFAPCDGLLTRAGLSEKFYP
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggataacaacaatgcatttcagctctcgtttgatgagcagcattacgcttggctggcg
attgatgtcccgggcgaaaaaatgaataccctgcaagcggcatttgcagaagagatgcaa
gccgtttttgcaacgctcaatgaaaagcgaggacagatcaaagggctgattatccactct
cttaagccggataactttattgcgggcgcggatgtccgcatgttagaagcttgccaatcg
gtacatgaagcacaagcgttagcctcgcaggggcaacagatgttccagcagcttgccgat
ttgcctttccctgtggtcgcggcgattcacggcccttgcttaggcggtggtttagaattg
gctctggcgtgtgattatcgtgtctgtactgaagatgaggtaacacgtctaggcttacca
gaagtgatgttgggtttgcttccgggctctggcgggacacagcgtttaccacgtttgatt
ggtttactgcctgcgctggatctcatcttaacgggcaaacaattgcgtgccaaaaaggcc
aagaaattgggtgtggttgatgcatgtgttccgcactcagtactgttggatgtggccaaa
cgtcttctagaagaaaaagggcacaaaaagcgcgctcaagttacgctaccgatcaaagaa
aaactgctcgccaataccggcttggggcgtaagttgatttttgaccaagcggccaagaaa
acgcagcagaaaacccgtggcaactaccccgcagcgcaagccattttagaggtcattcag
tatggcctagaaaaagggatgcatgctggcttggaatatgaagccaagcgtttcgctgaa
ttggtgatgacccgagaatcgaaagcactgcgctccattttctttgcgaccacagagatg
aaaaaagatctcggtgcggatgccaaacccgcacctgtggcggctgtgggcgtgctcggt
ggtggtttgatgggggctggcatcagtcacgttactgtggcgaaagccaaaacatcggtg
cgcatcaaagatgtggcgaatgatggtgtgctcaatgccctcaattacaactacaagctg
tttgataagcaaagacagcgcaagattttgactaaagcacagctgcaagcgcagatgtcg
cagctctcgggtgggactggctttgtgggttttgatcgctgcgatgtagtgatagaggct
gtgtttgaagacctgaaacttaagcaacaaatggtggcggatattgaagcgaatgccaaa
ccgacaacgatttttgcgaccaacacatcctcgctgccgatccatcagatcgcgagccaa
gcgcagcgtccgcaaaatattgtgggtttacattatttcagcccagttgaaaaaatgccg
ttggtggaagtgattcctcacgcgaccacctcggatgaaaccattgcgaccgtggtgaca
ttggcacgtaagcagggcaaaacaccgattgttgttaaagactgtgccggtttttatgtc
aaccgcattttagcgccttatatgaatgaagccgcgcaagtgctgatggcgggtgaacct
atcgaaaaactcgatgctgcgttactggattttggtttcccagtggggcctatcaccttg
cttgatgaagtaggggtcgatatcggagccaagatcatgccgattttggttaaagagctt
gggccgcgtttccaaggaccggacgtgtttgatgtgctgttgaaagataaccgtaaaggc
cggaaaagcggtaaaggtttctacacctacaaaggcagcaagaagaaagaagtcgataaa
tccgtttataaactgctgaagttaaccccggaatctaagctaaacgacaaagaaatcgcg
atgcgttgcttgttgcctatgctcaatgaggcggttcgttgtctcgatgaaggcattatt
cgcagtgcacgtgatggcgatatgggcgcgatttttggcatcggtttcccgccgttctta
ggtgggcctttccgttacatggacacgcttggtttaaccaaagtggtggaaatgatgaac
caacacaccgagaaatatggagagcggtttgctccatgtgacggtttgttgacgagagcg
ggattgagcgagaagttctacccctag
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