Vibrio cholerae O1 El Tor MS6: MS6_0841
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Entry
MS6_0841 CDS
T03666
Name
(GenBank) Cyn operon transcriptional activator
KO
K10918
LysR family transcriptional regulator, transcriptional activator AphB
Organism
vcs
Vibrio cholerae O1 El Tor MS6
Pathway
vcs05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
MS6_0841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcs03000
]
MS6_0841
Transcription factors [BR:
vcs03000
]
Prokaryotic type
Helix-turn-helix
LysR family
MS6_0841
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HVO_A0261_N
Motif
Other DBs
NCBI-ProteinID:
BAP02496
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All DBs
Position
1:complement(968420..969295)
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AA seq
291 aa
AA seq
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MKLDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEA
GERFYKDCSPLLERLASMTEEITDECRGASGRIRISAPSNLTKRMMMPMFNAFMEKYPDI
HIELMMSNQADDLDPTEWDVIFRVGPQRDSSLIARKIGEVKDILVASPQYLSSHPQPTHA
EELHQHQLLKGYPLLKWQLTNSQGETVVNSDRGRFQASALNVVRSACSEGLGITLMPDVM
LREFLEDGSLVQVLSDWSSNPRDIYMLYNHKDHQPEKVRLFIDFVIGYHLQ
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaactagatgacctaaacctctttcgactggttgtcgaaaatggaagctatacctca
acttcaaaaaaaaccatgatccctgtggcaacgatcacaagacggatccaagccttggag
gattccctaaaccttaggttgctcaatcgtcacgctcgtaaactgactctgaccgaagcg
ggcgaacgtttctacaaagattgctctcccctgctggagcgtctcgcttcaatgacagaa
gagatcaccgatgaatgtcgtggtgcgtcggggcgcattcgtatttctgcaccatccaat
ctgacaaaacgaatgatgatgccgatgttcaatgcctttatggaaaaatatcccgatatc
catattgaactgatgatgagtaaccaagccgacgatctcgaccccactgaatgggatgtg
attttccgagttggcccacagcgtgattccagcttgatagctcgtaaaatcggtgaagta
aaagacattttggttgccagccctcaatacttgtcgagccatccgcaaccgactcatgct
gaagagttgcatcaacatcagttactcaaaggttatccattgctcaaatggcaactgacc
aacagccaaggtgaaactgtcgtcaacagtgatcgcggccgttttcaagccagcgcactg
aatgttgttcgcagcgcatgttcagaaggtttaggcattacgctcatgcccgatgtgatg
ctgcgtgaatttcttgaggatggcagtttggtacaagtgctgtcggattggagctcaaat
ccgcgggatatctacatgctgtataaccacaaagatcaccagccggaaaaagtgcgcctg
tttattgattttgtgattggctaccacctgcaataa
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