Vibrio cholerae O1 El Tor MS6: MS6_0970
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Entry
MS6_0970 CDS
T03666
Name
(GenBank) transport ATP-binding protein CydD
KO
K16013
ATP-binding cassette, subfamily C, bacterial CydD
Organism
vcs
Vibrio cholerae O1 El Tor MS6
Pathway
vcs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
MS6_0970
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcs02000
]
MS6_0970
Transporters [BR:
vcs02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
MS6_0970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
RsgA_GTPase
SMC_N
AAA_21
AAA_29
AAA_7
AAA_16
AAA_22
nSTAND1
MMR_HSR1
AAA_23
cobW
TsaE
Motif
Other DBs
NCBI-ProteinID:
BAP02625
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Position
1:complement(1103053..1104840)
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AA seq
595 aa
AA seq
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MDKKKQRSLNLWLKQQSKLAKRWLAIAVGLGVLSSLFLVAQAALLASILHQLIIEQVDKH
LLIPHFFGLAALIAVQALCSWGREIAGFRCGEEIRRYIRQLILDKLRDLGPAYIKGKPAG
SWAALMLEQVENMHDFFARYLPQMSLSVLVPFVILAVVFPVNWAAGLIFLLTAPLVPLFM
ALVGIKAADASRKNFKALQRLSGHFYDRLQALTTIRLFDRTTAETEHMRGASEVFRHRTM
DVLRIAFLSSAVLEFFTSISIALTAVYFGFSYIGELNFGYYGASVTLFAGLFVLILAPEF
YQPLRDLGTYYHAKQLAVGAAESIVDFLQTEVDTLHSGERHLSDNDDIEIIANDLVVLSP
QGKRLAGPLSFTLQSGKTTALVGPSGAGKTSLINTILGFMPYQGSLTINGIELRELDHAQ
WRQTISWVGQNPLLLYGTIRDNVTLGKHNIADEQVTQTLQAAYAQEFVEQQGLDYPISDR
SAGLSVGQAQRLALARAILQNGRFWLLDEPTASLDARSEQYVMRGLTESIQQRTALFVTH
QLQPLQSVEQILVMENGLLVQAGHFEDLSQQSGLFATMLAANQALQAANKGDLDA
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaaaaaacagcgtagcttgaatctctggctcaagcagcaaagcaaactggct
aagcgctggctcgcaatagctgttgggttgggtgtgttatcaagcctatttctggtggcg
caagccgcactccttgcatcaattctgcatcagctgattattgaacaggtcgataaacat
ctgctcattccacacttctttggcttggctgcactcatcgcagtgcaggcgctgtgctct
tggggacgcgaaatcgctggttttcgttgtggagaagagatacgccgttatattcgacag
ctaatcctagacaagttacgcgacttagggccagcctatatcaaaggcaaaccggccggc
tcatgggcagccttaatgcttgagcaagtcgaaaacatgcacgacttctttgctcgctat
ctccctcagatgtctctttcggttttggtaccgtttgtgatccttgcggtcgtcttccca
gtgaactgggcggcaggactgatttttttgctcacggcgccattggtgccactctttatg
gcgttagtcggcattaaagccgccgatgccagccggaaaaactttaaagctctgcagcgt
ttatccgggcatttttatgatcgcttgcaagccctgaccaccattcgtctattcgatcgc
accacagcagaaaccgagcacatgcgcggcgcttcagaagtgtttcgccatcgcactatg
gatgtactgcggatcgcgttcctctcttctgcagtattagagtttttcacctcgatctcc
attgcactgaccgccgtgtactttggctttagctacattggtgaactcaacttcggttat
tacggcgcgagtgtcactctgtttgctgggttatttgtgttaatccttgctccggagttt
tatcagccgctgcgcgatctcggaacctattaccacgccaaacaactcgcggtgggcgca
gccgaatcgatcgtcgattttctgcaaaccgaagtggataccttacacagtggcgagcgt
catctcagcgataatgacgatattgaaattatcgccaatgatctggtcgttcttagtcca
caaggcaaacgcttagcaggcccgctctcatttacgttgcaaagcggcaaaaccaccgct
ctcgtcggaccaagtggcgcaggcaaaaccagcttaatcaataccatattaggctttatg
ccctaccaaggcagcttaaccattaacggcattgaactgcgcgagttagatcatgcgcag
tggcgacaaaccatcagttgggttgggcaaaatcctctactgctatatggcaccattcgc
gacaacgtgacgctaggcaaacacaatatcgccgatgagcaagtcacacagactctgcaa
gcggcttatgcccaagagtttgttgagcagcagggtttggattacccgatcagcgatcgc
tctgcggggctttccgtaggtcaagcccaacgcctcgccctcgctcgcgctattttgcaa
aatggccgcttttggttactcgatgagcccacggcaagcttagatgcgcgcagtgagcaa
tatgtgatgcgtggactgaccgaaagcattcagcaacgcactgcgttatttgtcactcac
cagttgcaaccgctgcaatcggtcgagcagatcttagtgatggaaaatggcttgctagta
caagcaggacattttgaagacttaagccagcaatctggtttatttgccactatgttagcc
gctaaccaagcgctacaagctgccaacaaaggggatctcgatgcgtga
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