Vibrio cholerae O1 El Tor MS6: MS6_0986
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Entry
MS6_0986 CDS
T03666
Name
(GenBank) Fe-S protein, homolog of lactate dehydrogenase SO1521
KO
K26063
(R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
Organism
vcs
Vibrio cholerae O1 El Tor MS6
Pathway
vcs00310
Lysine degradation
vcs01100
Metabolic pathways
vcs01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vcs00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
MS6_0986
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Gene cluster
GFIT
Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Fer4_8
BBE
Fer4_20
Fer4_9
Fer4_10
Fer4_4
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
BAP02641
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Position
1:1119673..1122708
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AA seq
1011 aa
AA seq
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MLPRLHHQSDVDPVVLTFLHELKTAGFTGDIETQYSSRLAVATDNSVYQQLPQAVVHPKS
TADVVLIGKISSKPEFERVTFSPRGGGTGTNGQSLTKGVVVDLSRHMNRILEINPQEGWV
RVQAGVIKDQLNDAVRPHGFFFSPDLSTSNRATLGGMVNTDASGQGSLQYGKTSDHVLSL
QAVFADGSLLETDLSQGLPAPNTFAAQAMQVTEQVCRTKREQIVAKFPPLNRFLTGYDLK
NALNEAEDRFDITRVLCGAEGSLAFITEAKLNLTPIPKARTLVNVKYDSFDSALRNAPLM
VEAKALSVETVDSKVLNLAKEDIIWHSVKDLLTDVPGKEMQGINMVEYAGQDSAQINQQV
AQLTARLDEMMANQQAGIIGYQVCSDLASINRIYNMRKKAVGLLGAAKGRAKPVAFTEDT
CVPPENLADFIVEFRALLDSKNLAYGMFGHVDAGVLHVRPALDLCDPKQELLMREISDQV
VKLVAKYGGLMWGEHGKGYRSEYGPEFFGEELFTELRRVKAAFDPHNKMNPGKICTPLDT
PFELVKVSDTKRGFYDRQIDVKVRDSFKQAMECNGNGLCFNYETSSPMCPSMKVTADRRH
SPKGRAGLVREWLRQLTEQGIDILDLEKATLESSPTIKSMLDRVRHAFSKDKEYDFSHEV
YEAMNGCLACKACASQCPIKVDVPSFRSRFLNIYHSRYPRPVKDYLVANIETLLPVMAKA
PQLVNSVLAQSSVQKLTAKTVGYVDAPLLSVPTLAQRLRRHPVVLFDMQRLAGLSQEERE
QHVLIVQDPFTSYYDADVVEDFVALLLKLGKKPVLLPFKPNGKAQHIKGFLRQFRSTAAN
TAAFLTQVADLNIPLVGVDPALVLCYRDEYVEILGKERGEFSVLTVHEWLKPRLSQFTPQ
VTDAQPWYLLAHCTEKTKLPNAEKEWVEIFRHFGTQLNAVAVGCCGMAGTFGHEVDKLTM
SRDIYDLSWQPALASLPKERCLVTGYSCRSQVKRFEQIKPKHPLQALLHLL
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgttaccaagactccatcaccaatccgacgttgatccggtggttttaacttttttacac
gagttaaaaaccgcaggatttaccggtgatattgaaacccaatactccagccgtcttgcg
gtagcgacggataacagcgtctaccaacaattgcctcaagcggtcgtacatcctaaatcc
accgctgatgttgttcttataggaaagattagttcaaaaccagaatttgagagagtgact
ttttcacctcgtggtggcggtacgggcacgaatggtcaatcgctgactaaaggggtggtc
gttgatttgtcgcggcatatgaatcgtatcctagaaattaacccgcaagagggatgggta
cgagtgcaggcgggggtcattaaagatcaactcaatgatgcagtacgcccacacggtttt
ttcttctctccggatctttcgaccagtaatcgcgcgacgcttggcggcatggttaacacc
gatgcttcagggcaagggtcgctacaatatggcaaaacgtcggatcacgtactctcgctg
caagcggtatttgccgatggttctttgctggaaaccgatctctcgcaaggtttgcctgct
cccaatacgtttgctgcgcaagcgatgcaagtcacggagcaggtttgccgcaccaaacgt
gagcaaattgtcgcgaaatttccgccgctcaaccgctttttgactggatacgatttaaaa
aatgccctaaatgaagccgaagatcgctttgatatcacgcgggtgttgtgtggtgcagaa
ggctcactggcgtttattaccgaagctaaactcaatttaacgcctatccccaaagcacgc
acgttagtgaatgtgaaatacgacagctttgattctgcactgcgtaatgcgcctttaatg
gttgaagcgaaagctttgtcggtagaaactgttgactcgaaagtgctcaatcttgccaaa
gaagacattatttggcacagcgtaaaagacttgctgactgatgtgccgggcaaagagatg
caaggcatcaatatggtcgaatacgcaggccaagacagcgcgcagattaatcagcaagtc
gcacaattaaccgcgcgccttgatgagatgatggccaaccaacaagcgggaattattggc
tatcaagtctgtagtgatttagcgagcatcaaccgcatttacaatatgcgtaaaaaagcg
gtgggcttgctcggtgcagccaaaggccgcgctaaaccggttgcctttaccgaagatacc
tgtgtgccgcctgagaacttagccgattttatcgttgaatttcgcgcgctgctcgattcc
aaaaatctggcgtatggcatgtttgggcatgtggatgcgggcgtattgcatgtgcgtcct
gcgcttgacttgtgcgatcccaagcaagaattgttgatgcgtgaaatctccgatcaagtg
gttaagctcgtcgctaaatatggcggtttgatgtggggggagcatggcaaaggctatcgt
tcggaatatggccctgaattttttggtgaggagctgttcactgaactgcgtcgtgtgaaa
gcggcgtttgacccgcacaataagatgaatccgggcaagatttgtaccccacttgataca
ccgtttgagctggtgaaagtctccgacactaaacgtggtttttacgatcgccaaatcgac
gtcaaagtgcgcgacagctttaagcaagcgatggagtgtaacggtaacggtttgtgcttt
aactacgaaactagctccccgatgtgtccttcaatgaaggtgacggcggatcgtcgccac
tcgccgaaagggcgcgcaggattagtgcgagaatggttacgtcaactgacggagcagggt
attgatatcctcgatcttgaaaaagccacgctcgaatcctcgccaacaattaaatctatg
ctagatcgggttcgtcatgcttttagcaaagataaagagtacgacttttcgcatgaagtg
tacgaagcgatgaatggttgcttggcctgtaaggcctgtgcaagccagtgtccgattaag
gtggatgtgcccagtttccgttcgcgttttctgaatatctatcacagccgttatccgcgc
ccagtcaaagattatttagtcgcgaatatcgaaaccttattacctgtgatggcgaaggct
ccgcaactggtgaatagtgtgttagcacaatcttcggtgcaaaaattaaccgctaaaacg
gtgggttatgttgatgcgcctctcttgtcggtaccaacactcgcacagcgtttacgccgt
catcccgtcgtcctgtttgatatgcagcgtttggcggggttatcgcaagaagagcgcgag
caacatgtgttgatcgtgcaagatccgtttaccagttattacgatgcggatgtggtcgaa
gattttgtcgccctgctgcttaaattaggcaaaaaaccagtattgttgccgtttaaaccc
aatggcaaagcgcaacatattaagggctttctacgccaatttcgttcgacggcagcgaat
accgcggcatttctgactcaagtggcggatctcaatattccgctcgtgggtgtagatcct
gctttggtgctttgctatcgcgatgagtatgttgaaatattaggcaaagagcgcggtgag
ttttcggttctgacggttcatgaatggctcaaaccacgcctgtcgcagtttacgcctcaa
gtaaccgatgcacagccttggtacttattggcgcactgtacggagaaaactaagctgccg
aatgcggaaaaagagtgggtggaaatcttccgccactttggtacgcagctcaatgcggtg
gcggtagggtgctgtggtatggcgggtacctttggtcatgaggtggataaattaaccatg
tctcgcgatatttacgatttgagttggcaacccgcattagcgtcgctaccgaaagagcgc
tgtttggtcaccggttactcgtgtcgtagccaagtgaaacggtttgagcaaatcaaacct
aagcatccgttgcaggctctgttacacttgctataa
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