Vibrio cholerae O1 El Tor MS6: MS6_1164
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Entry
MS6_1164 CDS
T03666
Name
(GenBank) cryptochrome
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vcs
Vibrio cholerae O1 El Tor MS6
Brite
KEGG Orthology (KO) [BR:
vcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcs03400
]
MS6_1164
Enzymes [BR:
vcs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
MS6_1164
DNA repair and recombination proteins [BR:
vcs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
MS6_1164
Prokaryotic type
MS6_1164
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BAP02819
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All DBs
Position
1:1332548..1334005
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AA seq
485 aa
AA seq
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MENINLVWLKRDLRLTDHAPLQAALTSGRPTLLLYLFEPMLFGDAHYSERHWRFVWQSLQ
AINRDLAQSKGEVLIVTSDWQTCFARIAERYAIEAIYSHQEVGLACTFQRDLALAQWCQQ
HDIVWHEFPYAAVIRGAQTRKNWDEHWQQVMRSPCCDPDLTRANWLKLDAAALGLRSDIP
ATWQSKQAGMQTGGSDMAWATLEDFFVRRGREYYRSISSPSLARHACSRMSPYLAWGNIS
LREMYQTLLKHWSVAGFRRSLIALSSRLHWHCHFIQKFESECEMEFRCVNRAYDSLLQQS
SEAPAAQFAAWQTGHTGIPLVDACMRCLIQTGYLNFRMRAMLVSVLTHHMNVDWRAGVTY
LAQLFLDFEPGIHYPQFQMQAGVTGTNTIRIYNPTKQAQEHDNEGQFIHKWVPELAQVPV
PLLFEPWLMTPLEAQMYQVPLESPYLKPVMDLEASAKQARDRLWQWQKLPAVQAEAMRIL
ARHVR
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatatcaatctggtatggctcaaacgcgacctaaggctgaccgaccacgcgcca
ttacaagcggcgttaacttcggggcgaccgacgttactactctatctgtttgagccaatg
ctgtttggcgatgcacattacagcgaacgacactggcgctttgtttggcaatcattgcaa
gccatcaatcgtgatttggcgcagagcaaaggggaggtgttgatcgtcacatccgattgg
caaacctgctttgcacgtattgctgagcgctacgccattgaggcgatttattctcatcaa
gaagtcggtttagcctgcacttttcagcgcgatcttgcgctggcacagtggtgccagcaa
cacgacatcgtctggcatgaatttccttatgccgccgtgatccgcggggcgcaaacccgt
aaaaattgggatgagcattggcagcaagtaatgcgctccccttgctgcgatccggatcta
acacgcgccaattggttgaagctggatgccgcagcgcttggtttgcgcagcgatatccct
gccacatggcagagtaaacaagcgggcatgcaaactggcggcagtgatatggcgtgggcg
acgctggaggattttttcgtgcgtcgagggcgagagtattaccgctccatatcaagtccg
agcttagcgcgccacgcatgctcgcggatgtcgccttatcttgcatgggggaatatctca
ctacgggagatgtaccaaaccttgctcaaacactggtcggtagcgggatttcgccgcagc
ctgattgcgttgtcatcgcgtttgcattggcattgtcactttatccaaaaatttgaatca
gaatgtgagatggagtttcgctgcgtcaaccgcgcttatgattcactcttgcagcaatca
agcgaagcccccgccgcgcagttcgccgcttggcaaaccgggcacaccggcattccactg
gtcgatgcctgtatgcgctgcttaattcaaaccggatacctcaactttcgcatgcgcgcg
atgttggtgagcgtgttaactcatcatatgaatgtcgattggcgagcgggcgtgacttat
ttggcgcaactgttcctcgattttgaaccgggcattcattacccgcagtttcaaatgcaa
gcaggggtaacgggcaccaacaccatccgcatttataacccgaccaagcaagcacaagag
catgacaatgaagggcagtttattcacaaatgggtgccagagttggcgcaagtgcctgta
ccgctgctctttgaaccctggctgatgacaccgcttgaagcgcagatgtatcaagtaccg
cttgagagcccttacctcaagccggtgatggatttggaagccagtgccaagcaagcacgg
gatcgcttatggcagtggcagaaactgcctgcggtacaagccgaagcgatgcgtatcctc
gcgcgccatgtgcggtaa
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