Vibrio cholerae O1 El Tor MS6: MS6_1196
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Entry
MS6_1196 CDS
T03666
Name
(GenBank) ABC transporter, periplasmic spermidine putrescine-binding protein PotD
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
vcs
Vibrio cholerae O1 El Tor MS6
Pathway
vcs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
MS6_1196
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcs02000
]
MS6_1196
Transporters [BR:
vcs02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
MS6_1196
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
Lipoprotein_8
SBP_bac_11
PhrC_PhrF
Motif
Other DBs
NCBI-ProteinID:
BAP02851
LinkDB
All DBs
Position
1:complement(1371278..1372315)
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AA seq
345 aa
AA seq
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MKNKLFASALCAAALFTTNAMAKDQELYFYNWSEYIPSEVLEDFTKETGIKVIYSTYESN
ESMYAKLKTQGAGYDLVVPSTYFVSKMRKEGMLQEIDHSKLSHFKDLDPNYLNKPFDPGN
KFSIPYIWGATGIGINTDMLDKKSLKNWGDLWDAKWAGQLMLMDDAREVFHIALSKLGYS
PNTTNPKEIKAAYRELKKLMPNVLVFNSDFPANPYLAGEVSLGMLWNGSAYMARQEGAPI
QIIWPEKGTIFWMDSISIPAGAKNIEAAHKMIDFLLRPENAAKIALEIGYPTPVKTAHDL
LPKEFANDPSIYPPQSVIDNGEWQDEVGEASVLYDEYFQKLKVND
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataaactgtttgcgagtgctctgtgcgcagcagcattgttcaccaccaatgca
atggctaaagaccaagaactttatttctacaactggtctgaatatatcccgagcgaagtc
ttagaagactttaccaaagaaaccggaatcaaggttatctactctacctacgaatccaat
gaaagcatgtatgccaagctcaaaacgcaaggcgctggttatgatcttgtggttccttcc
acttattttgtctctaagatgcgcaaagaaggcatgctgcaagagattgaccattcaaaa
ctctcacatttcaaagacttggatccaaactatctcaacaagccttttgatccaggcaat
aaattctctatcccttatatctggggagcgacgggtatcggcattaacaccgatatgctg
gataaaaaatcactcaaaaactggggcgatctgtgggatgccaaatgggcaggtcaatta
atgctgatggatgacgctcgtgaagtcttccatatcgccctgagtaagctgggatactcg
cctaacacgaccaatcccaaagagattaaagccgcttaccgtgagttgaaaaagctgatg
ccaaatgtcttagtgtttaactctgacttcccggccaatccttacctcgctggtgaagtg
tcactaggtatgttatggaatggctcagcgtatatggcccgccaagaaggcgcaccaatc
cagattatctggcctgaaaaaggcaccattttttggatggacagcatctcgattcctgcc
ggagccaaaaatatcgaggccgcccacaagatgattgacttcttactgcgcccagaaaat
gctgcaaaaatcgccttagaaatcggctatccaacaccagttaaaaccgcgcatgaccta
ctgcccaaagagtttgcgaatgacccaagtatctacccaccacaatcagtgatagacaat
ggcgagtggcaagatgaagttggagaagctagcgtgctttacgatgagtatttccaaaag
ctaaaagtgaacgattaa
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