Vibrio cholerae O1 El Tor MS6: MS6_1219
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Entry
MS6_1219 CDS
T03666
Name
(GenBank) RTX toxin transporter, ATP-binding protein
KO
K12530
ATP-binding cassette, subfamily B, bacterial RtxB
Organism
vcs
Vibrio cholerae O1 El Tor MS6
Pathway
vcs02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vcs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MS6_1219
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcs02000
]
MS6_1219
02044 Secretion system [BR:
vcs02044
]
MS6_1219
Transporters [BR:
vcs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
MS6_1219
Secretion system [BR:
vcs02044
]
Type I secretion system
RTX toxin transporter
MS6_1219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
AAA_16
SMC_N
AAA_22
DUF87
nSTAND3
AAA_18
ABC_ATPase
AAA_29
AAA_30
AAA_5
RsgA_GTPase
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
BAP02874
LinkDB
All DBs
Position
1:complement(1396144..1398252)
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AA seq
702 aa
AA seq
DB search
MISNNERLTLICIHFYLSIISGNREKIKDESHLTDTENLKEELDKIQKEHKVKIRTKFSQ
FKNIESLKTPAILFDQHDLPFVLAKANKDKCLIQRPNKETPEVISSHELNSAWNKKSLVI
QQAQSRFDITWFIPEFLQHKRVLSEILLFSFVLQILALISPLFFQVVMDKVLVHQAWSTL
DVLVFGLVITGVIEVVLRGLREYQYAHTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAI
VTRVRELDTIREFLTGSMFTLTVELMFMFVFLYVMSLLSAPLTGLFIATVPCYVLLAWWL
TPRMQAAIEKQFSHAAANTSFLTETVAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQ
QLNNRSNHLVQLLQKITSVAILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVELW
GQFIQTRVAIEKLGDMLNLPVEQQTGSDNVTISGAISFKNILFRYQPDIPPTINDLSLDI
RAGETLGVVGTSGSGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVLQEN
FLFHKSVSENIAQSKPEASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLSGGQRQ
RLAIARTLLSDPKVLILDEATSALDDESQAVIQANMASIARGRTVITIAHRLSTVRDCDR
IIVLHQGTIVEQGSHQQLLAYGKQYKQLWQLQQELKQEEASA
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgatatccaacaatgaaagactcacgctgatatgcattcatttttatttaagtatcatc
agcggtaatcgagaaaaaataaaagacgaaagtcatttaactgacactgaaaacctcaaa
gaagaactggataaaatacagaaagaacacaaagttaaaatacgcacaaaattttcacaa
tttaaaaacatcgaatcactaaaaacacctgcaattttatttgatcagcacgacttacca
tttgttctagcaaaagctaataaagataaatgtttaatacaaagacctaataaagaaact
cccgaagttatctcttctcacgaacttaattctgcttggaataaaaaatcgttagtaata
cagcaagcacaatcgcgctttgatatcacttggttcattcctgaattcctccagcataaa
agagtgctgagcgaaattcttttattttcgttcgtactgcaaattctggctctgatctca
cctctattttttcaagtggtgatggataaagtgctggtccaccaagcttggtcgacgttg
gatgtactggtatttggtctagtgattacaggggtgatcgaagtggtgttacgcggattg
cgcgaatatcagtatgcccataccgccaaccgaattgacatacagcttggacttaaactg
gtgcagcatctgtttggactgccgctcatgttttttaaatcacgccaagtcggcgcgatt
gtcacgcgtgtgcgcgagctcgacaccattcgcgagtttttgactggctctatgtttacc
ttaacggtcgagctaatgtttatgttcgtctttctttacgtcatgagcttactttctgct
ccgctcacagggctatttatcgctactgtgccctgttatgtccttctcgcttggtggctc
acaccaagaatgcaggcggcgattgaaaagcagttttcacatgctgcggcaaatacctca
tttctcactgaaaccgtagccggtagtgaaacgctgaaaagtttggcggttgagccgcga
tttatccgacgctgggatgaacaaaccgaaaaaatggtcacaacgggttatgacgtccag
cagcttaataaccgttctaaccatttagtgcagttgctgcaaaaaatcaccagcgtcgcc
attttatggttgggggcgacggaagtgctctcacttgaaatgaccattggtcaactgatc
gctttcaacatgatgaccaaccacattgcgcagcccttagcgcggatggtcgagctgtgg
ggacaatttattcaaactcgggtcgccatcgagaagctcggcgatatgcttaacctgccg
gtagaacaacagacagggagtgacaatgtcactataagcggcgctatcagtttcaaaaat
atcctctttcgttatcaaccggatattcctcctaccattaatgatttgtcgctagacatc
cgtgcaggtgaaacattgggggtggtcggtacctcgggctcaggcaaaagcaccctcgcc
cgtctgttattgcgactttatagccctgagcaaggcagtattaccattgacggcattcca
ctcaatcacatcaatgttcaacagctcagacagcgagtgggtgtggtattgcaagagaac
tttttatttcacaaaagcgtgagtgaaaatattgcccaatctaagcctgaggcaagtttg
gaggagatcattgaggccgcaaagctctcgggcgcgcatgacttcatcctcaaacttccc
atgggttacgacacggtattagcagaaggtggtcaatcgctttcaggtggtcaacggcag
cgtctcgcgattgcacgcacccttttatcagatccgaaagtgctgattttggatgaagca
accagtgcgctggatgacgaatctcaagccgtcattcaagccaatatggccagcattgcc
agaggccgtacggtgatcacgattgctcatcgcttgtctacggtgcgtgattgcgatcgc
atcatagtgcttcatcagggcacgattgttgagcaaggctcacaccaacaattactcgcc
tacggcaaacaatacaaacagttatggcagcttcagcaagagctcaaacaagaggaagcc
tccgcatga
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