Vibrio cholerae O1 El Tor MS6: MS6_1375
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Entry
MS6_1375 CDS
T03666
Name
(GenBank) GGDEF family protein
KO
K20954
diguanylate cyclase [EC:
2.7.7.65
]
Organism
vcs
Vibrio cholerae O1 El Tor MS6
Pathway
vcs05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
MS6_1375
Enzymes [BR:
vcs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
MS6_1375
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
GGDEF_GdpP
VP4_helical
GGDEF_2
Salyut
Motif
Other DBs
NCBI-ProteinID:
BAP03030
LinkDB
All DBs
Position
1:1561721..1562941
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AA seq
406 aa
AA seq
DB search
MIAVSIVLINTPKLLFEDKIHAYEKEQLQLTVELQKTRIDYASLILEHLETHSLTPQLQE
FFNLYHGNLCVLDENSPQQCPLSIIDAVQSTTSASDFVASTSVNITFAEGSILFFQVQGK
QIRVLWFNHASFWPAPQKNISLVLVRGNHIQFLDNPIAHYNALLNYTILRHRDDYGTLQF
ENMELSFLRWNLGEYQLISVFNDKVRLFNLIYWVMSASLTLLLTLTWFLTRLNLQKVAAQ
RHVYIDNLTRLNNRHFLNKISTKFIEHPHSIAAMIDIDHFKKINDQYGHITGDRILQAVA
SCLRKNVRDGDTIIRFGGEEFLLLFQAHSNKEAWYMLDRLRQRVKDDHSLYGTTISIGFT
FIDGSLPAAISRADTALYQAKEAGRNQVVADSEKENDSAADLPIQC
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgatagcggtcagcatagtattgattaacacgcctaaattattgtttgaagataagatc
cacgcttatgaaaaagagcaattgcaactgactgtcgaactacagaaaacccgtattgac
tacgcaagcctaattctagaacatctagaaacccactcattgactccacagttgcaagaa
ttcttcaatctgtaccatggcaatttatgtgtgctggatgagaattccccacaacaatgc
ccgttgagcattatcgatgcggttcaatccaccacttcagcaagtgattttgtcgcttct
acctcagtaaacatcacgtttgcagaaggttctatcctattttttcaagtgcaaggcaaa
cagatccgagtgctatggttcaaccatgcttcattttggccagcaccacagaaaaacatc
agcttggtcttggttcgcggtaatcacattcagttcttagataatccgattgcacactat
aacgctctactgaattacacgattttgcgccaccgagatgattacgggactttgcagttt
gaaaacatggagttgagctttcttcgttggaaccttggtgaatatcaattgatcagtgtg
tttaacgacaaagtacgcttgtttaatcttatttactgggtaatgtcggccagtttaacc
ctgttactgactttgacttggttcctcactcgactcaatctacaaaaagtagcggcgcag
cgtcatgtttatatcgacaacttaactcggctcaataaccgacattttctgaataaaatc
agtactaagtttattgaacaccctcactccattgccgcgatgatcgacatcgatcacttt
aagaaaattaatgaccaatatgggcacattaccggagatcgcattctacaggcggtggcc
tcttgtctgcgcaaaaatgtccgagatggagacaccattatccgctttggtggagaagag
tttttactattgttccaagcccattcaaacaaagaagcttggtacatgctcgaccgattg
cgtcagcgagttaaagacgatcatagcttgtacggaacaacgatttcgattggttttact
tttatcgatggtagtttacccgctgctatttcgcgggcagatactgcactctatcaagca
aaagaagcaggacgtaatcaagtggttgccgacagcgagaaagagaatgactcagcagca
gatttaccgattcagtgctga
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