Vibrio cholerae O1 El Tor MS6: MS6_1430
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Entry
MS6_1430 CDS
T03666
Name
(GenBank) microbial collagenase, secreted
KO
K01387
microbial collagenase [EC:
3.4.24.3
]
Organism
vcs
Vibrio cholerae O1 El Tor MS6
Brite
KEGG Orthology (KO) [BR:
vcs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vcs01002
]
MS6_1430
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
vcs02042
]
MS6_1430
Enzymes [BR:
vcs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.3 microbial collagenase
MS6_1430
Peptidases and inhibitors [BR:
vcs01002
]
Metallo peptidases
Family M9
MS6_1430
Bacterial toxins [BR:
vcs02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
MS6_1430
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M9
Peptidase_M9_N
PPC
SeqA_N
Motif
Other DBs
NCBI-ProteinID:
BAP03085
LinkDB
All DBs
Position
1:1631797..1634235
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AA seq
812 aa
AA seq
DB search
MSFQQRIQHHPIAWACVIAGLSYSSYSQAACEIQDLQPARDLPAQIAVATQACYNSWFYA
PTATLDNLYSEASLAHLQTVLDAEIARYTGEAQQARRLENYGEFIRAAYYVRYNAGREPY
SQALSQRFAQSIDRFLRHPHAFDQGREQVGAMKSLSLMVDNVKQLPLTMDAMILALHRFN
RETAQDTQWVDGLNNLFRAMSGHVGNSEFYRYLAANTQHIDTLYRFALDNEWALETDAEF
LVYNALRETGRLLISPDAITKQKARHVMRQVIARYPLGSKHDKLWLAAVEMLHYYAPEVL
QQLGIDLDAAKRDLAARILPNRFECQGPAIIRSQDLSDAQAAQACDVLDKKEQDFHQVAN
TGLAPVADDYNTRVEVVVFANNSSYVNYSSFLFGNTTDNGGQYLEGNPADQNNQARFVAY
RYANDADLSILNLEHEYTHYLDARFNQYGSFSDNLAHGHIVWWLEGFAEYMHYKQGYQAA
VKLISQGKLSLSDVFATTYSNDTNRIYRWGYLAVRFMLEKHPQDVESLLALSRTGQFDQW
AQSVKLLGERYNTEFSAWLDTLQRDNPDNPDNPDNPDNPEQPNPEPNAVTQLAANSSLTL
TGKAYSEHLFYVDVPEYSREFHVQISGEGDADLYMSYQQVAHYYDYQVTEFTYGSNEQIT
FKPEQNGYIKPGRYYLSVTGRADYSAVILNTHLVTEQPNEQPTIKDDLAPVLLEAGNSQS
LTVHRQRYVAIYVPKGVSEVQVWLTASEQNRGNVDLFAAKAYWPTREQFEHASTGAGSHE
YLRIPVTQEGYVHFSLNAQQLGDTVEMVAYFD
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttttcaacaacgtatccaacatcaccccattgcttgggcgtgcgtcatcgctggt
ctttcttactcctcctattcacaagcagcttgtgagatacaagatttacagcccgcgcgc
gatcttcctgcgcaaattgccgtggctacacaagcttgttacaactcatggttttacgca
ccaacggcaaccttggataacctctatagcgaagcttctctagcgcatttacaaactgtg
ctcgatgctgaaattgctcgctatactggtgaagcgcagcaagctcgtcgcttggaaaac
tatggtgagttcattcgcgcagcgtattacgtgcgttataacgctgggcgtgaaccttat
tctcaagcactcagtcaacgctttgctcaatcgatcgaccgctttttacgtcatccgcat
gcttttgaccaaggccgtgaacaggtgggcgcaatgaagagcctaagtttaatggtggat
aacgttaagcagttaccgctcactatggatgcgatgatcttagctctgcaccgcttcaat
cgagaaacggcgcaagatacacaatgggtcgatggtttaaataacttattccgtgcgatg
tctggccatgtgggtaactcggagttttaccgctacttagccgccaacactcaacatatt
gataccttgtatcgattcgctctggacaatgagtgggcattagaaaccgacgctgagttt
ttggtttacaacgctctgcgtgaaactggccgcttattgattagcccagatgccattacc
aagcaaaaggctcgtcatgtgatgcgacaagtgattgctcgctatcctttagggagtaaa
cacgacaaattgtggttagctgccgttgagatgttgcattattacgcacctgaggtgctg
caacagctcggtatcgatcttgatgcagcgaagcgcgatttagccgcgcgcattttgcca
aaccgctttgaatgccaaggccctgccattattcgctcgcaagatctttccgatgcgcaa
gccgcgcaagcctgtgacgtattggataaaaaagagcaagattttcaccaagtggcaaat
acgggattggcaccggtcgctgatgattacaacactcgcgttgaggtggtggtgtttgcc
aataacagcagctatgtcaattactcctcgtttttatttggcaataccaccgacaatggc
gggcagtatttagaaggcaaccctgcggatcaaaacaatcaagcccgttttgtcgcctat
cgttatgccaatgatgcggatttgtcgattctcaatttagagcatgagtacactcattat
ctggacgcgcgcttcaaccagtatggttcgttcagtgataacttagcccatggtcatatt
gtgtggtggttagaaggtttcgcggaatatatgcattataagcagggctaccaagcggcg
gttaagctgatttctcaaggtaaattgagcctttctgatgtgtttgccaccacctactcg
aatgatacgaaccgcatttatcgctggggctacttagcggtacgctttatgttggaaaag
catccacaagacgtggaaagcttgctggcactctctcgtactgggcagtttgatcagtgg
gcacagagtgtcaaattactgggtgaacgctataacaccgagttttcggcgtggctggat
acattgcaacgcgataatccagataatccagataatccagataatccagataatccagaa
cagcctaacccagaacccaatgcggtcactcagttagcggccaattcgtccttaacactg
acaggaaaggcgtacagcgagcatctgttctatgtggatgtgccagagtacagccgagag
ttccacgttcagatctccggggagggagatgccgatctgtacatgagctaccagcaggtt
gcccattactatgattatcaggtaacggaatttacctatggcagcaacgagcaaattacc
ttcaaacctgagcagaatggttacatcaaacccggacgctactatttaagtgtgacagga
cgtgcggattactcagcagtcatcctcaacacacacctagtcactgaacagcctaatgag
caaccgactatcaaagatgatcttgctcctgtgcttttagaagcgggtaacagtcaaagc
cttaccgtgcatcgacaacgttacgtcgccatctacgtgccaaaaggcgtcagtgaagta
caagtatggctcaccgcttcagaacaaaaccgaggcaatgtcgatctgtttgcagcaaaa
gcgtattggccaactcgagagcagtttgagcacgcctcaactggtgcgggcagtcatgag
tatttgcgtattcctgtgacacaagaaggctatgtgcacttttcgttaaacgcacaacaa
ctcggcgacacggtcgaaatggtggcctatttcgactga
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