Vibrio cholerae O1 El Tor MS6: MS6_1676
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Entry
MS6_1676 CDS
T03666
Name
(GenBank) integration host factor beta subunit
KO
K05788
integration host factor subunit beta
Organism
vcs
Vibrio cholerae O1 El Tor MS6
Brite
KEGG Orthology (KO) [BR:
vcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcs03032
]
MS6_1676
03036 Chromosome and associated proteins [BR:
vcs03036
]
MS6_1676
03400 DNA repair and recombination proteins [BR:
vcs03400
]
MS6_1676
DNA replication proteins [BR:
vcs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MS6_1676
Chromosome and associated proteins [BR:
vcs03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
MS6_1676
DNA repair and recombination proteins [BR:
vcs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
MS6_1676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
DUF4777
HU-CCDC81_euk_2
Glycos_trans_3N
Ybfg_C
Motif
Other DBs
NCBI-ProteinID:
BAP03331
LinkDB
All DBs
Position
1:complement(1918194..1918472)
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AA seq
92 aa
AA seq
DB search
MTKSELIERLCAEQTHLSAKEIEDAVKNILEHMASTLEAGERIEIRGFGSFSLHYREPRV
GRNPKTGDKVELEGKYVPHFKPGKELRERVNL
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgactaagtccgaactgatagaaagactctgtgccgaacaaacgcacttgtctgcgaaa
gagatcgaagatgcggtaaaaaatatccttgagcatatggcctcaacgttagaagcgggg
gagcgcatcgagattcgtggtttcggtagcttttccttacactatcgtgagccgcgtgta
gggcgtaatcctaagactggcgataaggtggagttggaaggtaagtacgttccgcatttc
aaaccaggtaaggaactacgcgaacgcgttaacttgtaa
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