KEGG   Vibrio cholerae O1 El Tor MS6: MS6_1688
Entry
MS6_1688          CDS       T03666                                 
Name
(GenBank) two component, sigma-54 specific, central transcriptional regulator of acidic amino acid uptake
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
vcs  Vibrio cholerae O1 El Tor MS6
Pathway
vcs02020  Two-component system
Brite
KEGG Orthology (KO) [BR:vcs00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    MS6_1688
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:vcs02022]
    MS6_1688
Two-component system [BR:vcs02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   MS6_1688
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 Response_reg AAA_5 HTH_8 AAA AAA_2 AAA_16 AAA_22 HTH_30 AAA_7 AAA_3 DUF6716 DUF815 FleQ HTH_50
Other DBs
NCBI-ProteinID: BAP03343
LinkDB
Position
1:1932484..1933824
AA seq 446 aa
MCDVFLIDDESDIRIALAQSFELADLNAQFFASVEEALLAIKAQGLPLVIVSDICLPGLS
GQNLLSSVLHQDSELPVILITGHGDISMAVKAMHDGAYDFIEKPFAPERLIDTVHRAIEK
RRLTLENRQLKRSLKVSQTLGPRIIGETAAIQTLRDTIAQVADTQADILLFGETGTGKEL
VARSLHEQSSRREQNFVAINCGAVPENLIESELYGHEKGAFTGADSRRVGKFEHAQGGTL
FLDEIESMPMQAQIRLLRVLQERVIERIGSNELIPLDIRVIAATKIDLKQAAAEGKFRQD
LYYRLNIVTLTIPPLRERREDIPALFHHFLLVAAARYGKAATALTASDVQSLLSHDWPGN
VRELRNAAERYVLLGKLAQFAESHEPKSKLLGLNEQVAEFEKSLLEQTLIECGGSIKATM
ERLHLPRKTLYDKMQKYQLDKESYKP
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgtgtgatgtatttttgattgatgatgagagcgatatccgcattgcgctcgctcaaagt
ttcgaattggcagacctcaacgcgcagttttttgccagtgtcgaagaggcactgctggca
atcaaggcgcaaggactcccattggtgatcgtcagtgatatctgcttacccggtttaagt
ggacagaatttactgagctccgtattacatcaagacagtgaactgcctgtcattcttatc
actggacatggcgatatttcgatggcggtcaaagccatgcatgatggtgcttacgatttt
attgaaaagcccttcgcgcctgagaggttgattgacacggtacaccgtgccatcgaaaaa
cgtcgccttactttggagaaccgtcagctaaaacgcagtttaaaagtcagccaaacctta
ggcccgcgaattattggtgaaaccgccgccattcaaactctgcgcgataccattgcccaa
gtcgcggatacccaagcggatattttattgtttggtgaaacaggaaccggcaaggagttg
gttgcccgttcactgcatgaacagagctcgcgccgtgaacagaattttgttgcgattaac
tgtggtgcggtgccggagaacttgattgagagcgagctctacggccatgaaaaaggcgcg
tttacgggggcagacagccgtcgagtgggtaagtttgagcatgctcaaggtggcactctg
tttttagatgagattgaatcgatgccgatgcaagcgcagatccggctgctgcgtgtgctg
caagagcgagtgatcgaacggattggctcgaatgaactcattccccttgatattcgggtg
attgccgccactaaaatcgatttaaaacaagccgctgccgaagggaaatttcggcaagat
ctctactatcggctcaacattgtcaccttaacgatcccaccgctgcgtgagcgcagagag
gacattcctgcccttttccaccatttcttactggtcgctgccgcacgttatggtaaagcg
gctacagcactgacggcctccgatgtgcaaagcttgcttagtcacgattggccgggcaac
gtgcgggaattgcgtaatgccgcagaacgctatgtgttactcggtaagttggcgcaattt
gctgaaagccatgagccaaaatccaaattactcggactgaatgaacaagtcgcggagttt
gagaaatcacttttggagcagacgctgattgagtgtggtggcagcattaaagccaccatg
gagcgtctccaccttccacgtaaaaccttgtatgacaaaatgcagaaatatcagctcgat
aaagagagttacaaaccctga

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