Vibrio cholerae O1 El Tor MS6: MS6_1980
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Entry
MS6_1980 CDS
T03666
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vcs
Vibrio cholerae O1 El Tor MS6
Pathway
vcs03030
DNA replication
vcs03430
Mismatch repair
vcs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MS6_1980
03430 Mismatch repair
MS6_1980
03440 Homologous recombination
MS6_1980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcs03032
]
MS6_1980
03400 DNA repair and recombination proteins [BR:
vcs03400
]
MS6_1980
Enzymes [BR:
vcs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MS6_1980
DNA replication proteins [BR:
vcs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MS6_1980
DNA repair and recombination proteins [BR:
vcs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MS6_1980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BAP03635
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Position
1:complement(2248209..2248952)
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AA seq
247 aa
AA seq
DB search
MNTSNNAEYQRIVVLDTETTGMNREGGPHYEGHRIIEIGAVEIINRKLTGRHFHVYLKPD
RDIQLEAIEVHGITDEFLKDKPEYKDVHEEFVDFIKGAELVAHNAPFDVGFMDYEFAKLG
GAIGKTSDFCKVTDTLAMAKRIFPGKRNNLDILCERYGIDNSHRTLHGALLDAEILADVY
LLMTGGQTSLQFSSVTQNSGELSAESLKRARSERKALKVLAASADELQAHQDRLDIVAKS
GTCLWRS
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgaatactagcaacaatgcagaataccaacgcatcgtggtgctcgataccgaaaccacg
ggtatgaaccgcgaaggcggcccccattacgagggacatcgaattattgagatcggtgca
gttgaaattatcaaccgtaaactcaccggacggcattttcacgtctacttaaaaccagat
cgcgatattcaattagaggcgattgaagttcacggtattaccgatgagtttctaaaagat
aagcccgagtacaaagatgtccatgaggagtttgtagacttcatcaaaggggccgagctg
gttgcccacaatgcaccgtttgacgtcggctttatggattacgagtttgctaaactcggt
ggtgcgatcggtaaaaccagcgatttttgcaaagtgaccgatactttggcgatggccaag
cggattttccccggtaaacgcaataacttggatatcttgtgtgagcgttacggcattgat
aactcacaccgaaccctgcacggcgctttgctcgatgcggagattctagccgacgtttat
ctattgatgaccggtgggcagacttcactgcaattttcatcggtcacgcaaaatagtggg
gaattgagcgcagaatcgttaaaacgtgctcgttcagagcgaaaagcgttaaaggtttta
gcggctagcgccgatgaactacaagcacatcaagatcgtttggacatagtggccaaaagt
ggcacttgcctatggcgtagttag
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