Vibrio cholerae O1 El Tor MS6: MS6_2367
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Entry
MS6_2367 CDS
T03666
Name
(GenBank) transcriptional regulator, PadR family
KO
K10917
PadR family transcriptional regulator, regulatory protein AphA
Organism
vcs
Vibrio cholerae O1 El Tor MS6
Pathway
vcs02024
Quorum sensing
vcs05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MS6_2367
05111 Biofilm formation - Vibrio cholerae
MS6_2367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcs03000
]
MS6_2367
Transcription factors [BR:
vcs03000
]
Prokaryotic type
Helix-turn-helix
PadR family
MS6_2367
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vir_act_alpha_C
PadR
HTH_34
Motif
Other DBs
NCBI-ProteinID:
BAP04022
LinkDB
All DBs
Position
1:2681777..2682316
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AA seq
179 aa
AA seq
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MSLPHVILTVLSTRDATGYDITKEFSASIGYFWKASHQQVYRELNKMGEQGLVTCVLEPQ
EGKPDRKVYSITQAGRSALGEWFDQPTAHPTVRDEFSAKLMACSVQSAEPYRLQLAELVE
ESRKLVAHYQEIEAAYYANPAVLDKQQRLERLTLRRNLLVRQAWIQWADEVLAELNAMA
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaccacacgttatccttactgttcttagcacacgcgatgcaaccgggtacgat
ataaccaaagagttttctgctagcattggctacttctggaaagccagccatcagcaggta
tatcgtgaactcaataaaatgggggaacagggtttagtgacttgtgttctggaaccacag
gaaggcaaaccagatcgcaaggtttattctataacccaagctggccgcagcgctttaggt
gagtggtttgatcaaccaaccgcacacccaaccgtgcgtgatgagtttagtgcgaaattg
atggcttgttcagtacaatcggcagaaccttaccgtctgcaactggctgaactggttgaa
gaatcgcgtaaattggtcgctcactatcaggaaatcgaagccgcttattacgctaaccca
gccgtgttagacaagcagcaacgtttagagcgtttaacgctacgtcgtaatttactggtt
cgccaagcatggattcaatgggcggacgaagtgttggcagaattgaacgcgatggcataa
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