Vibrio cholerae O1 El Tor MS6: MS6_2395
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Entry
MS6_2395 CDS
T03666
Name
(GenBank) helicase PriA essential fororiC/DnaA-independent DNA replication
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
vcs
Vibrio cholerae O1 El Tor MS6
Pathway
vcs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MS6_2395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcs03400
]
MS6_2395
Enzymes [BR:
vcs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MS6_2395
DNA repair and recombination proteins [BR:
vcs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MS6_2395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
PriA-like_WH
AAA_30
AAA_19
TrwB_AAD_bind
PIF1
AAA_22
Zn_ribbon_6
AAA_16
Motif
Other DBs
NCBI-ProteinID:
BAP04050
LinkDB
All DBs
Position
1:complement(2705627..2707831)
Genome browser
AA seq
734 aa
AA seq
DB search
MRPSIARVCLPVPLDKSFDYLIPAHLFPVLGGRVQVPFGRQTLVGIVQSLTHQSDFPIEQ
LKSVQAVLDDAPVWPDKLQSLLHWCSQFYHYPLGETYANALPGALRKGKAAELTSHKEWR
LTALGQEQLMQGVKRGAVKQAQVLHLLQHGALSHQTLLDEEVSSTTLKALVEKGWIECEE
RKPVARPWPQELEAKVDKPRLNQEQAIAIAAVNSQQGFGCFLLEGVTGSGKTEVYLNLIT
PVLARGEQALVLVPEIGLTPQTINRFRQRFNVPVEVMHSALNDTERLNAWLAARDKVAGI
VIGTRSALLTPFAKLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHLENIPIVLGSATP
ALETLHNALSGKYHHLQLTQRAGNALPTRNHALDVKGLYLESGLSAPLIAEMRRHLSAGN
QVMLFLNRRGFSPALMCHECGWIAECQRCDAYYTYHQHSNEMRCHHCGSQRPVLHQCKGC
GSTQLVTVGVGTEQLEAQLHTLFPEYRSVRIDRDSTRRKGSLESALTAIRKGEYQILIGT
QMLAKGHHFPDVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVVLQTH
HPEHSLLQALLHKDYHHFALTALEERKLAQLPPYSFLSLFRAEANHTAQVEDFLRQVRET
LRCNPWFDSECMVLGPTPAPLAKRAGKFRWQLLLQTPNRTLMQKILQSARPALQQLPLSS
KVRWSIDIDPQDLS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccctccattgcccgagtttgcctacctgtacctctggataagtctttcgactat
ctgatcccagctcatctatttccagtgctgggcggtcgtgtgcaagtgccttttgggcga
caaaccttggtcggtattgtccagtcgctgacacatcaatccgattttcctatcgaacaa
ctgaaatccgtgcaagccgttttggatgacgcgcccgtgtggccagataaactgcagtct
ctgctgcactggtgtagccagttttatcattatccgctcggtgaaacgtacgcgaatgcc
ttgcccggcgcactgcgcaaaggcaaagcggcagagctgactagccataaagagtggcgt
ttgaccgcgcttggtcaagagcaactgatgcaaggggtgaagcgtggcgcggtaaaacaa
gcgcaagttctccatttgttgcagcacggcgctttatcgcaccaaactttgcttgatgaa
gaggtgagcagcacgaccctcaaagccttggtcgaaaaagggtggattgagtgtgaagag
cgtaaacctgtggcgcgtccttggccgcaagagctggaagctaaagtcgataaacctagg
cttaatcaagagcaggcgatcgcgattgcggcggtgaatagccagcaaggtttcggctgc
tttttattagaaggggtaacgggctcaggtaaaacagaggtgtatcttaacctcatcaca
ccggtattggcgcgtggtgaacaagccttggtgttggtgccggaaattggtttaactcca
caaaccatcaatcgttttcgccaacgttttaatgtccccgtcgaagtcatgcactcggcg
ctcaacgacactgaacgcctcaacgcttggctggcggcgcgcgataaagtggcggggatt
gtgattggcacacgctcggcgctgctcacaccctttgccaaattgggcattattattgtt
gatgaagaacatgatagttcttacaagcagcaagatagtctgcgttatcacgcccgagat
gtcgctgtgatgcgcgcgcatttggaaaacattccgatcgtgcttggctcggcgacgcca
gccttggaaacgttgcataatgcgctcagtggtaaataccatcacttgcaactgacgcag
cgtgctggtaatgcactacccacacgtaaccatgcgttggatgtgaaagggctctatctg
gaaagtggtctgtctgcgcctttgattgcggaaatgcgccgccatttgtcggcgggcaat
caggtgatgctgtttttaaaccgccgcggtttttctccggccttgatgtgtcacgagtgt
ggctggattgcggagtgccagcgctgtgatgcctattacacctaccatcaacacagcaat
gaaatgcgctgccaccattgtggttcacagcgtcctgttctccatcaatgcaaagggtgc
ggctcgactcaactggttactgtcggcgttggtacggaacagcttgaagcgcaattacac
actctattccctgagtatcgttcagtgcggattgatcgagatagcacgcggcgtaaaggc
agtttggaatcggcgttaaccgcgattcgcaaaggcgaatatcagattttgattggtacg
caaatgctcgccaaaggacatcacttccccgatgttaccttggtcgcgttgttggatgtc
gatggctcattgtacagcagtgattttcgcgcttctgagcgcttggctcagctctttatt
caagtcgcagggcgggcagggcgtgccagcaagccgggcgaagtggtgctacaaacgcat
catcccgaacacagtttgctacaagccttgctgcataaggattaccaccattttgccctg
acggcgttggaagagcgtaagctggcgcagttgcccccttattctttcttgagcttattt
cgagctgaagccaatcacaccgctcaagtggaagattttttgcgtcaagtgcgcgaaacc
ttgcgctgcaatccttggtttgatagcgaatgtatggtgctcgggccaacgcctgcgcca
ctcgcgaaacgagcgggaaaattccgttggcaacttttactacaaacgccgaatcgcacc
ctgatgcagaagattttgcaaagcgcacgtccagcactgcaacaattaccgctgtcgagc
aaggtgcgctggtcgatcgatattgatccgcaagatttgagctaa
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